RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CXCL5P42830 114 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 CIRBPQ14011 172 aaKnown RBP9.03□□□□□ -0.96
CCDC78-213ENST00000482878 DYNLRB2Q8TF09 96 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 Q9HAA7 133 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 INAFM2P0DMQ5 153 aa9.02□□□□□ -0.97
CCDC78-213ENST00000482878 RPL18AQ02543 176 aaKnown RBP9.02□□□□□ -0.97
CCDC78-213ENST00000482878 C18orf65Q6ZTR6 163 aa9.02□□□□□ -0.97
CCDC78-213ENST00000482878 COX7A2LO14548 114 aa9.02□□□□□ -0.97
CCDC78-213ENST00000482878 SLURP1P55000 103 aa9.01□□□□□ -0.97
CCDC78-213ENST00000482878 HIST1H4AP62805 103 aaKnown RBP9.01□□□□□ -0.97
CCDC78-213ENST00000482878 C5orf38Q86SI9 138 aa9.01□□□□□ -0.97
CCDC78-213ENST00000482878 Q9UF83 564 aa9.01□□□□□ -0.97
CCDC78-213ENST00000482878 SERP2Q8N6R1 65 aa9□□□□□ -0.97
CCDC78-213ENST00000482878 C1orf43Q9BWL3 253 aa9□□□□□ -0.97
CCDC78-213ENST00000482878 OXTP01178 125 aa8.99□□□□□ -0.97
CCDC78-213ENST00000482878 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
CCDC78-213ENST00000482878 DEFB131AP59861 70 aa8.99□□□□□ -0.97
CCDC78-213ENST00000482878 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
CCDC78-213ENST00000482878 ZNF843Q8N446 348 aa8.99□□□□□ -0.97
CCDC78-213ENST00000482878 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
CCDC78-213ENST00000482878 UBR5O95071 2799 aaPredicted RBP8.98□□□□□ -0.97
CCDC78-213ENST00000482878 WFDC11Q8NEX6 87 aa8.98□□□□□ -0.97
CCDC78-213ENST00000482878 UBE2E2Q96LR5 201 aa8.98□□□□□ -0.97
CCDC78-213ENST00000482878 CITED2Q99967 270 aaPredicted RBP8.98□□□□□ -0.97
CCDC78-213ENST00000482878 C14orf132Q9NPU4 83 aa8.98□□□□□ -0.97
CCDC78-213ENST00000482878 Q6ZSN1 163 aa8.98□□□□□ -0.97
CCDC78-213ENST00000482878 SETXQ7Z333 2677 aaKnown RBP8.97□□□□□ -0.97
CCDC78-213ENST00000482878 Q8N2B8 174 aa8.97□□□□□ -0.97
CCDC78-213ENST00000482878 TMEM89A2RUT3 159 aa8.97□□□□□ -0.97
CCDC78-213ENST00000482878 USP17L23D6RBM5 183 aa8.97□□□□□ -0.97
CCDC78-213ENST00000482878 Q9H8V8 135 aa8.97□□□□□ -0.97
CCDC78-213ENST00000482878 PRIMA1Q86XR5 153 aa8.96□□□□□ -0.97
CCDC78-213ENST00000482878 DGAT2L7PQ6IED9 249 aa8.96□□□□□ -0.98
CCDC78-213ENST00000482878 LINC00308Q8TCZ7 52 aa8.96□□□□□ -0.98
CCDC78-213ENST00000482878 UNC79Q9P2D8 2635 aa8.96□□□□□ -0.98
CCDC78-213ENST00000482878 RBMY1BA6NDE4 496 aaKnown RBP8.96□□□□□ -0.98
CCDC78-213ENST00000482878 RBMY1EA6NEQ0 496 aaKnown RBP8.96□□□□□ -0.98
CCDC78-213ENST00000482878 RBMY1DP0C7P1 496 aaKnown RBP8.96□□□□□ -0.98
CCDC78-213ENST00000482878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
CCDC78-213ENST00000482878 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
CCDC78-213ENST00000482878 MALP21145 153 aa8.95□□□□□ -0.98
CCDC78-213ENST00000482878 CHCHD7Q9BUK0 85 aa8.95□□□□□ -0.98
CCDC78-213ENST00000482878 PKIGQ9Y2B9 76 aa8.95□□□□□ -0.98
CCDC78-213ENST00000482878 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 CDKN2A-AS1Q9UH64 79 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 TINCRA0A1B0GVN0 87 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 IGHV3-53P01767 116 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 MRAPQ8TCY5 172 aa8.94□□□□□ -0.98
CCDC78-213ENST00000482878 IGHV3-38A0A0C4DH36 116 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 Q5XG85 94 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 DEFB113Q30KQ7 82 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 ZNF702PQ9H963 129 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 NBPF19A0A087WUL8 3843 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 PFN2P35080 140 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 LINC00467Q9BRT7 94 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 TMEM243Q9BU79 118 aa8.93□□□□□ -0.98
CCDC78-213ENST00000482878 DSCR9P59020 149 aa8.92□□□□□ -0.98
CCDC78-213ENST00000482878 C20orf197Q8N268 126 aa8.91□□□□□ -0.98
CCDC78-213ENST00000482878 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
CCDC78-213ENST00000482878 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
CCDC78-213ENST00000482878 GHRHP01286 108 aa8.91□□□□□ -0.98
CCDC78-213ENST00000482878 IGHV4-31P0DP07 118 aa8.91□□□□□ -0.98
CCDC78-213ENST00000482878 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 A8MTW9 85 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 A0A096LNT2 108 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 ZNF415Q09FC8 603 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 PIK3CD-AS1Q5SR53 167 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.9□□□□□ -0.98
CCDC78-213ENST00000482878 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 F8P00451 2351 aa8.9□□□□□ -0.98
CCDC78-213ENST00000482878 TIMM17BO60830 172 aa8.9□□□□□ -0.99
CCDC78-213ENST00000482878 FHL2Q14192 279 aa8.9□□□□□ -0.99
CCDC78-213ENST00000482878 NDUFA1O15239 70 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 CRPP02741 224 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 HILS1P60008 231 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 RPL35AP18077 110 aaKnown RBP8.89□□□□□ -0.99
CCDC78-213ENST00000482878 Q6JHZ5 121 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 SMR3AQ99954 134 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 TENM4Q6N022 2769 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 J3QLI3 93 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 LINC01561Q8N1V8 128 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 UPK3BQ9BT76 320 aa8.89□□□□□ -0.99
CCDC78-213ENST00000482878 Q6YL49 198 aa8.88□□□□□ -0.99
CCDC78-213ENST00000482878 NCR3O14931 201 aa8.88□□□□□ -0.99
CCDC78-213ENST00000482878 FAM222AQ5U5X8 452 aa8.88□□□□□ -0.99
CCDC78-213ENST00000482878 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
CCDC78-213ENST00000482878 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
CCDC78-213ENST00000482878 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
CCDC78-213ENST00000482878 COX6A2Q02221 97 aa8.87□□□□□ -0.99
CCDC78-213ENST00000482878 MAP6D1Q9H9H5 199 aa8.87□□□□□ -0.99
CCDC78-213ENST00000482878 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
CCDC78-213ENST00000482878 BEAN1Q3B7T3 259 aa8.86□□□□□ -0.99
CCDC78-213ENST00000482878 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
CCDC78-213ENST00000482878 PRO0628Q9UI54 55 aa8.86□□□□□ -0.99
CCDC78-213ENST00000482878 SLPIP03973 132 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms