RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 LINC00310P59036 64 aa6.96□□□□□ -1.29
GARNL3-216ENST00000481242 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.3
GARNL3-216ENST00000481242 Q6ZS46 218 aa6.96□□□□□ -1.3
GARNL3-216ENST00000481242 PKD1L2Q7Z442 2459 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 ARHGAP32A7KAX9 2087 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 DSCAML1Q8TD84 2053 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 TIMM17BO60830 172 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 ODF3L2Q3SX64 289 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 ATG2AQ2TAZ0 1938 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 TMEM223A0PJW6 202 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 ZNF706Q9Y5V0 76 aaPredicted RBP6.95□□□□□ -1.3
GARNL3-216ENST00000481242 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
GARNL3-216ENST00000481242 FAM19A1Q7Z5A9 133 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 MTORP42345 2549 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 POLR2KP53803 58 aaKnown RBP6.94□□□□□ -1.3
GARNL3-216ENST00000481242 WDR87Q6ZQQ6 2873 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 A0A1W2PPR1 153 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 RNF185Q96GF1 192 aa6.94□□□□□ -1.3
GARNL3-216ENST00000481242 C18orf65Q6ZTR6 163 aa6.93□□□□□ -1.3
GARNL3-216ENST00000481242 LOC107984640A0A0U1RRK4 108 aa6.93□□□□□ -1.3
GARNL3-216ENST00000481242 IGKV3D-7A0A0C4DH55 119 aa6.93□□□□□ -1.3
GARNL3-216ENST00000481242 TEX49A0A1B0GTD5 131 aa6.93□□□□□ -1.3
GARNL3-216ENST00000481242 UBE2D3P61077 147 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 UBE2D2P62837 147 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 COX17Q14061 63 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 LINC00308Q8TCZ7 52 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 TSHBP01222 138 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 CRYGAP11844 174 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 WFDC10AQ9H1F0 79 aa6.92□□□□□ -1.3
GARNL3-216ENST00000481242 LINC00959A0A1B0GUT2 108 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 Q6JHZ5 121 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 SMR3AQ99954 134 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 M0R378 163 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-216ENST00000481242 DHRS4-AS1Q9P1J3 65 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 A0A0J9YWU9 116 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 EP400Q96L91 3159 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 EPG5Q9HCE0 2579 aa6.91□□□□□ -1.3
GARNL3-216ENST00000481242 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
GARNL3-216ENST00000481242 USP17L23D6RBM5 183 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 H0Y9J4 135 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 MRPS12O15235 138 aaKnown RBP6.9□□□□□ -1.3
GARNL3-216ENST00000481242 NRACQ8N912 160 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 LY6G6CO95867 125 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 BPY2O14599 106 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 VPREB1P12018 145 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
GARNL3-216ENST00000481242 PRR9Q5T870 116 aa6.9□□□□□ -1.31
GARNL3-216ENST00000481242 C11orf21Q9P2W6 132 aa6.9□□□□□ -1.31
GARNL3-216ENST00000481242 Q8IZM0 81 aa6.89□□□□□ -1.31
GARNL3-216ENST00000481242 RETNQ9HD89 108 aa6.89□□□□□ -1.31
GARNL3-216ENST00000481242 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
GARNL3-216ENST00000481242 XAGE1AQ9HD64 81 aa6.89□□□□□ -1.31
GARNL3-216ENST00000481242 PROK1P58294 105 aa6.89□□□□□ -1.31
GARNL3-216ENST00000481242 IGLV2-18A0A075B6J9 118 aa6.88□□□□□ -1.31
GARNL3-216ENST00000481242 NANOS2P60321 138 aaKnown RBP6.88□□□□□ -1.31
GARNL3-216ENST00000481242 PMAIP1Q13794 54 aa6.88□□□□□ -1.31
GARNL3-216ENST00000481242 COX8CQ7Z4L0 72 aa6.88□□□□□ -1.31
GARNL3-216ENST00000481242 TRAV23DV6A0A075B6W5 121 aa6.88□□□□□ -1.31
GARNL3-216ENST00000481242 CDC42SE2Q9NRR3 84 aa6.88□□□□□ -1.31
GARNL3-216ENST00000481242 POLQO75417 2590 aa6.87□□□□□ -1.31
GARNL3-216ENST00000481242 TANC2Q9HCD6 1990 aa6.87□□□□□ -1.31
GARNL3-216ENST00000481242 TNRC6BQ9UPQ9 1833 aaKnown RBP6.87□□□□□ -1.31
GARNL3-216ENST00000481242 EGFEM1PQ0D2K5 195 aa6.87□□□□□ -1.31
GARNL3-216ENST00000481242 UPK3BQ9BT76 320 aa6.87□□□□□ -1.31
GARNL3-216ENST00000481242 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
GARNL3-216ENST00000481242 UBE2D1P51668 147 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 Q8N2B8 174 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 LST1O00453 97 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 BCE1O60756 84 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 CPAMD8Q8IZJ3 1885 aa6.86□□□□□ -1.31
GARNL3-216ENST00000481242 LRCOL1A6NCL2 159 aa6.85□□□□□ -1.31
GARNL3-216ENST00000481242 TRAV7A0A075B6U4 112 aa6.85□□□□□ -1.31
GARNL3-216ENST00000481242 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
GARNL3-216ENST00000481242 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
GARNL3-216ENST00000481242 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
GARNL3-216ENST00000481242 M0R2N4 97 aa6.84□□□□□ -1.31
GARNL3-216ENST00000481242 C1orf158Q8N1D5 194 aa6.84□□□□□ -1.31
GARNL3-216ENST00000481242 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.32
GARNL3-216ENST00000481242 PRB2P02812 416 aaPredicted RBP6.83□□□□□ -1.32
GARNL3-216ENST00000481242 SDIM1Q6ZPB5 146 aa6.83□□□□□ -1.32
GARNL3-216ENST00000481242 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
GARNL3-216ENST00000481242 WFDC9Q8NEX5 89 aa6.82□□□□□ -1.32
GARNL3-216ENST00000481242 TRIAP1O43715 76 aa6.82□□□□□ -1.32
GARNL3-216ENST00000481242 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
GARNL3-216ENST00000481242 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
GARNL3-216ENST00000481242 CYSRT1A8MQ03 144 aa6.82□□□□□ -1.32
GARNL3-216ENST00000481242 A0A096LNI7 61 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 A0A1B0GUV1 79 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 IGIPA6NJ69 53 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 EXPH5Q8NEV8 1989 aa6.81□□□□□ -1.32
GARNL3-216ENST00000481242 FHL2Q14192 279 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 464.9 ms