RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 P01737 135 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
SPTA1-205ENST00000481212 IQCJQ1A5X6 159 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 TMEM97Q5BJF2 176 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 AQP10Q96PS8 301 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 MAP1LC3BQ9GZQ8 125 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 VAX2Q9UIW0 290 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
SPTA1-205ENST00000481212 A0A096LNI7 61 aa3.98□□□□□ -1.77
SPTA1-205ENST00000481212 M0QY20 66 aa3.98□□□□□ -1.77
SPTA1-205ENST00000481212 C15orf56Q8N910 161 aa3.98□□□□□ -1.77
SPTA1-205ENST00000481212 NKX6-2Q9C056 277 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-205ENST00000481212 MED28Q9H204 178 aa3.98□□□□□ -1.77
SPTA1-205ENST00000481212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.97□□□□□ -1.77
SPTA1-205ENST00000481212 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
SPTA1-205ENST00000481212 H7C1H1 209 aa3.97□□□□□ -1.77
SPTA1-205ENST00000481212 SNAI2O43623 268 aa3.97□□□□□ -1.77
SPTA1-205ENST00000481212 SPINK6Q6UWN8 80 aa3.97□□□□□ -1.77
SPTA1-205ENST00000481212 LINC00173Q6ZV60 143 aa3.97□□□□□ -1.77
SPTA1-205ENST00000481212 SFT2D1Q8WV19 159 aa3.97□□□□□ -1.77
SPTA1-205ENST00000481212 AP1S3Q96PC3 154 aa3.97□□□□□ -1.77
SPTA1-205ENST00000481212 OR5AL1P0C617 328 aa3.96□□□□□ -1.78
SPTA1-205ENST00000481212 COTL1Q14019 142 aa3.96□□□□□ -1.78
SPTA1-205ENST00000481212 AMMECR1LQ6DCA0 310 aa3.96□□□□□ -1.78
SPTA1-205ENST00000481212 RASL11AQ6T310 242 aa3.96□□□□□ -1.78
SPTA1-205ENST00000481212 OR2D3Q8NGH3 330 aa3.96□□□□□ -1.78
SPTA1-205ENST00000481212 FAM213BQ8TBF2 198 aa3.96□□□□□ -1.78
SPTA1-205ENST00000481212 TRAV26-2A0A0B4J265 109 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 SMLR1H3BR10 107 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 CXCL5P42830 114 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 XCL1P47992 114 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 LYZL1Q6UWQ5 148 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 FER1L6-AS1Q8NA97 138 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 NIT2Q9NQR4 276 aa3.95□□□□□ -1.78
SPTA1-205ENST00000481212 TNXBP22105 4242 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 A0A1W2PNN7 141 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 RAB19A4D1S5 217 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 ARPC5O15511 151 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 PFDN1O60925 122 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 S100A9P06702 114 aaKnown RBP3.94□□□□□ -1.78
SPTA1-205ENST00000481212 NTF3P20783 257 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 HERVK_113P61574 105 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 KCNRGQ8N5I3 272 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 Q8N9L7 120 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 RPL39LQ96EH5 51 aaKnown RBP3.94□□□□□ -1.78
SPTA1-205ENST00000481212 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 BATF3Q9NR55 127 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 CYTL1Q9NRR1 136 aa3.94□□□□□ -1.78
SPTA1-205ENST00000481212 CCL25O15444 150 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 TSPAN13O95857 204 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 IFNA1P01562 189 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 MT-ND6P03923 174 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 CXCL1P09341 107 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 FGF6P10767 208 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 RPL35P42766 123 aaKnown RBP3.93□□□□□ -1.78
SPTA1-205ENST00000481212 FOXA3P55318 350 aaPredicted RBP3.93□□□□□ -1.78
SPTA1-205ENST00000481212 CCL20P78556 96 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 LINC00299Q6ZSB3 139 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 CARD19Q96LW7 228 aa3.93□□□□□ -1.78
SPTA1-205ENST00000481212 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
SPTA1-205ENST00000481212 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 IGLC6P0CF74 106 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 BCL2P10415 239 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 CACNG7P62955 275 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 CENPWQ5EE01 88 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 C1orf137Q5JT78 98 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 PHF5AQ7RTV0 110 aaKnown RBP3.92□□□□□ -1.78
SPTA1-205ENST00000481212 PCP2Q8IVA1 136 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 GATD1Q8NB37 220 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 TCEAL7Q9BRU2 100 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 GNG13Q9P2W3 67 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 PSORS1C2Q9UIG4 136 aa3.92□□□□□ -1.78
SPTA1-205ENST00000481212 IGHV1-58A0A0C4DH39 117 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 LINC00959A0A1B0GUT2 108 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 TRGC1P0CF51 173 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 PMCHP20382 165 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 UBE2AP49459 152 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 RPS20P60866 119 aaKnown RBP3.91□□□□□ -1.78
SPTA1-205ENST00000481212 TEX43Q6ZNM6 134 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 LINC01551Q86U37 167 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 OR5A1Q8NGJ0 315 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 LINC00474Q9P2X8 69 aa3.91□□□□□ -1.78
SPTA1-205ENST00000481212 IGLV4-69A0A075B6H9 119 aa3.9□□□□□ -1.79
SPTA1-205ENST00000481212 G3V3Q6 166 aa3.9□□□□□ -1.79
SPTA1-205ENST00000481212 APCSP02743 223 aa3.9□□□□□ -1.79
SPTA1-205ENST00000481212 RPL18AQ02543 176 aaKnown RBP3.9□□□□□ -1.79
SPTA1-205ENST00000481212 SS18Q15532 418 aa3.9□□□□□ -1.79
SPTA1-205ENST00000481212 C9orf116Q5BN46 136 aaPredicted RBP3.9□□□□□ -1.79
SPTA1-205ENST00000481212 RNASE13Q5GAN3 156 aaKnown RBP3.9□□□□□ -1.79
SPTA1-205ENST00000481212 BTF3L4Q96K17 158 aa3.9□□□□□ -1.79
SPTA1-205ENST00000481212 A0A096LNJ9 63 aa3.89□□□□□ -1.79
SPTA1-205ENST00000481212 LOC107984640A0A0U1RRK4 108 aa3.89□□□□□ -1.79
SPTA1-205ENST00000481212 C19orf71A6NCJ1 209 aa3.89□□□□□ -1.79
SPTA1-205ENST00000481212 SDHAF1A6NFY7 115 aa3.89□□□□□ -1.79
SPTA1-205ENST00000481212 F2Z2F3 143 aa3.89□□□□□ -1.79
SPTA1-205ENST00000481212 GNG4P50150 75 aa3.89□□□□□ -1.79
SPTA1-205ENST00000481212 EIF5AP63241 154 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms