RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 LINC00474Q9P2X8 69 aa3.32□□□□□ -1.88
HDAC6-223ENST00000480525 RYR1P21817 5038 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 A0A096LNJ9 63 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 TRAV12-1A0A0B4J245 112 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 TINCRA0A1B0GVN0 87 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 GAGE12HA6NDE8 117 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 IFITM10A6NMD0 228 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 EPM2AB3EWF7 344 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 PRSS1P07477 247 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 CXCL5P42830 114 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 PMVKQ15126 192 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 KIAA1644Q3SXP7 199 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 LINC00242Q5T6M2 205 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 URB1-AS1Q96HZ7 61 aa3.31□□□□□ -1.88
HDAC6-223ENST00000480525 MRPL35Q9NZE8 188 aaKnown RBP3.31□□□□□ -1.88
HDAC6-223ENST00000480525 TRBV30A0A0K0K1B3 111 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 LOC389332A0A1B0GUA5 103 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 TRGC2P03986 189 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 AKR1D1P51857 326 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 WFDC2Q14508 124 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 Q8IZM0 81 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 SCGB3A1Q96QR1 104 aa3.3□□□□□ -1.88
HDAC6-223ENST00000480525 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
HDAC6-223ENST00000480525 IGLV4-69A0A075B6H9 119 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 ZNF561-AS1K7EIQ3 104 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 HSBP1O75506 76 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 MALP21145 153 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 XCL1P47992 114 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 CLPSL2Q6UWE3 100 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 SDIM1Q6ZPB5 146 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 DNAH8Q96JB1 4490 aa3.29□□□□□ -1.88
HDAC6-223ENST00000480525 HERC2O95714 4834 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HSPG2P98160 4391 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 IGLV5-39A0A0G2JS06 123 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 hDV102S1A0JD36 115 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 H3BRM9 83 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 NDUFA1O15239 70 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BKO60814 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BJP06899 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BOP23527 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BBP33778 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BDP58876 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BCP62807 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 KIAA0087Q14695 138 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST2H2BEQ16778 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BHQ93079 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BNQ99877 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HIST1H2BMQ99879 126 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 CHAC1Q9BUX1 264 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 HSPB8Q9UJY1 196 aa3.28□□□□□ -1.88
HDAC6-223ENST00000480525 SMIM1B2RUZ4 78 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 F8VRH5 84 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 LEPROTL1O95214 131 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 SLPIP03973 132 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 PLNP26678 52 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 XGP55808 180 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 LINC00310P59036 64 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 KRTAP10-1P60331 282 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 COX17Q14061 63 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 BAGE3Q86Y29 109 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 Q8N1X5 172 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 IFI27L1Q96BM0 104 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 CARD19Q96LW7 228 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 OPRPNQ99935 248 aaPredicted RBP3.27□□□□□ -1.89
HDAC6-223ENST00000480525 GEMIN7Q9H840 131 aaKnown RBP3.27□□□□□ -1.89
HDAC6-223ENST00000480525 PLAC8Q9NZF1 115 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 CDKN2A-AS1Q9UH64 79 aa3.27□□□□□ -1.89
HDAC6-223ENST00000480525 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 LOC107984640A0A0U1RRK4 108 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 C11orf86A6NJI1 115 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 SERF1AO75920 110 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 PRSS2P07478 247 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 SPAG11BQ08648 103 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 DEFB104AQ8WTQ1 72 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 ORAOV1Q8WV07 137 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 CAMK2N2Q96S95 79 aa3.26□□□□□ -1.89
HDAC6-223ENST00000480525 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-223ENST00000480525 A0A0J9YXV3 536 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 LINC00587B1AMM8 73 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 NDUFC2-KCTD14E9PQ53 114 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 LECT2O14960 151 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
HDAC6-223ENST00000480525 PTTG1IPP53801 180 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 COX6A2Q02221 97 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 RNASE13Q5GAN3 156 aaKnown RBP3.25□□□□□ -1.89
HDAC6-223ENST00000480525 C5orf38Q86SI9 138 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 LINC00469Q8N7U9 141 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 PLA2G2DQ9UNK4 145 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 VPS13BQ7Z7G8 4022 aa3.25□□□□□ -1.89
HDAC6-223ENST00000480525 CKS1BP61024 79 aa3.24□□□□□ -1.89
HDAC6-223ENST00000480525 PET117Q6UWS5 81 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms