RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 C10orf126Q8N4M7 172 aa4.33□□□□□ -1.72
CMSS1-203ENST00000478909 NOP10Q9NPE3 64 aaKnown RBP4.33□□□□□ -1.72
CMSS1-203ENST00000478909 IGHV3OR16-12A0A075B7B8 117 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 TRAV26-1A0A087WT03 109 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 TRGV4A0A0C4DH28 118 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 OCIAD2Q56VL3 154 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 Q6ZUT4 128 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 LINC01561Q8N1V8 128 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 WFDC9Q8NEX5 89 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 ATP6V0E2Q8NHE4 81 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 CITED1Q99966 193 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 PRO1854Q9UHT4 67 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 NDUFA12Q9UI09 145 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 OTOGQ6ZRI0 2925 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-203ENST00000478909 NOTCH3Q9UM47 2321 aa4.32□□□□□ -1.72
CMSS1-203ENST00000478909 TRIAP1O43715 76 aa4.31□□□□□ -1.72
CMSS1-203ENST00000478909 EMP1P54849 157 aa4.31□□□□□ -1.72
CMSS1-203ENST00000478909 TSPEAR-AS2P59090 65 aa4.31□□□□□ -1.72
CMSS1-203ENST00000478909 MIAQ16674 131 aa4.31□□□□□ -1.72
CMSS1-203ENST00000478909 HIST2H2BCQ6DN03 193 aa4.31□□□□□ -1.72
CMSS1-203ENST00000478909 OPRPNQ99935 248 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-203ENST00000478909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-203ENST00000478909 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 A0A1B0GUV1 79 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-203ENST00000478909 K7ERJ3 54 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE7O76087 117 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 COX6CP09669 75 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE12FP0CL80 117 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE12GP0CL81 117 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE12IP0CL82 117 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 MIFP14174 115 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
CMSS1-203ENST00000478909 LINC00242Q5T6M2 205 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 PRO0255Q9UI72 69 aa4.3□□□□□ -1.72
CMSS1-203ENST00000478909 FN1P02751 2386 aaKnown RBP4.29□□□□□ -1.72
CMSS1-203ENST00000478909 TEP1Q99973 2627 aaKnown RBP4.29□□□□□ -1.72
CMSS1-203ENST00000478909 ANK3Q12955 4377 aaKnown RBP4.29□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 INAFM1C9JVW0 142 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 H3BMG7 143 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 TSPAN13O95857 204 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 CFC1P0CG37 223 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE4Q13068 117 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 GAGE5Q13069 117 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 MUC7Q8TAX7 377 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 LITAFQ99732 161 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 CDKN2A-AS1Q9UH64 79 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
CMSS1-203ENST00000478909 ATRQ13535 2644 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 HIVEP1P15822 2718 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 IGHV3-38A0A0C4DH36 116 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 A4D1N5 150 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 A8MZ25 164 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 SMIM1B2RUZ4 78 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 KRTAP10-3P60369 221 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 RBX1P62877 108 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 NTM-AS1Q6ZSK4 140 aa4.28□□□□□ -1.72
CMSS1-203ENST00000478909 NIPBLQ6KC79 2804 aaeCLIP4.28□□□□□ -1.72
CMSS1-203ENST00000478909 F5H768 121 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 G3V4G9 280 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 H3BNG1 76 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 APOMO95445 188 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 IGHV3-33P01772 117 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 PRM2P04554 102 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 SPINK8P0C7L1 97 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 FAM222AQ5U5X8 452 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 CEMP1Q6PRD7 247 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-203ENST00000478909 MUSTN1Q8IVN3 82 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 ZNF625Q96I27 306 aaPredicted RBP4.27□□□□□ -1.73
CMSS1-203ENST00000478909 SMR3AQ99954 134 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
CMSS1-203ENST00000478909 A0A087WZ39 114 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 TRAV8-3A0A0A6YYJ7 113 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 LOC107984156A0A0G2JMH3 177 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 ATP5G1P05496 136 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 SPART-AS1P0CW21 52 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 CXCL5P42830 114 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 SS18Q15532 418 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 ATXN8Q156A1 80 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 ARL17AQ8IVW1 177 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 CHCHD5Q9BSY4 110 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 Q9H8V8 135 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 Q9UF83 564 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 PRO0461Q9UI25 63 aa4.26□□□□□ -1.73
CMSS1-203ENST00000478909 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 IGHV3OR16-9A0A0B4J2B5 98 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 IBA57-AS1B1ANH7 110 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 PRSS2P07478 247 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 SCGB1C2P0DMR2 95 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 DEFB130BP0DP73 79 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 DEFB130AP0DP74 79 aa4.25□□□□□ -1.73
CMSS1-203ENST00000478909 DAD1P61803 113 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms