RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 TMEM263Q8WUH6 116 aaKnown RBP0.5□□□□□ -2.33
VLDLR-204ENST00000478776 SMR3AQ99954 134 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 SNHG12Q9BXW3 62 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 KRTAP2-4Q9BYR9 128 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 KRTAP2-1Q9BYU5 128 aa0.5□□□□□ -2.33
VLDLR-204ENST00000478776 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
VLDLR-204ENST00000478776 ASXL3Q9C0F0 2248 aa0.49□□□□□ -2.33
VLDLR-204ENST00000478776 M0R3E3 92 aa0.49□□□□□ -2.33
VLDLR-204ENST00000478776 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
VLDLR-204ENST00000478776 CACFD1Q9UGQ2 172 aa0.49□□□□□ -2.33
VLDLR-204ENST00000478776 PDCD11Q14690 1871 aaKnown RBP0.49□□□□□ -2.33
VLDLR-204ENST00000478776 CACNA1CQ13936 2221 aa0.49□□□□□ -2.33
VLDLR-204ENST00000478776 TTC28Q96AY4 2481 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 A0A0G2JND7 137 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 A0A1B0GWA3 101 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 H7BZZ5 65 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 BCE1O60756 84 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 SERP2Q8N6R1 65 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 TRGV9Q99603 122 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 VAMP8Q9BV40 100 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 SPCS1Q9Y6A9 102 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 FAM208BQ5VWN6 2430 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 TTC37Q6PGP7 1564 aa0.48□□□□□ -2.33
VLDLR-204ENST00000478776 MYO7BQ6PIF6 2116 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 MARF1Q9Y4F3 1742 aaKnown RBP0.47□□□□□ -2.33
VLDLR-204ENST00000478776 ZFHX3Q15911 3703 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 BDP1A6H8Y1 2624 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 TRBV25-1A0A075B6N4 114 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 TRBV7-7A0A0K0K1E9 115 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 C10orf113Q5VZT2 155 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 PRO1933Q9H354 126 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 LINC00846Q9NV44 126 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 ARHGEF12Q9NZN5 1544 aa0.47□□□□□ -2.33
VLDLR-204ENST00000478776 BIVM-ERCC5R4GMW8 1640 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 SMARCA2P51531 1590 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 ASIPP42127 132 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 PMCHL1Q16048 86 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 PRO0255Q9UI72 69 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 TNCP24821 2201 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 PLEKHH2Q8IVE3 1493 aa0.46□□□□□ -2.34
VLDLR-204ENST00000478776 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 POLQO75417 2590 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 TRBV6-1A0A0K0K1D8 114 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 SYS1-DBNDD2H3BUS1 97 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 UQCRHP07919 91 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 TP53AIP1Q9HCN2 124 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 C1orf167Q5SNV9 1468 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 RAPGEF2Q9Y4G8 1499 aa0.45□□□□□ -2.34
VLDLR-204ENST00000478776 CLTCQ00610 1675 aaKnown RBP0.45□□□□□ -2.34
VLDLR-204ENST00000478776 EPRSP07814 1512 aaKnown RBP0.44□□□□□ -2.34
VLDLR-204ENST00000478776 ABCC2Q92887 1545 aa0.44□□□□□ -2.34
VLDLR-204ENST00000478776 I3L2K1 104 aa0.44□□□□□ -2.34
VLDLR-204ENST00000478776 PSMG4Q5JS54 123 aa0.44□□□□□ -2.34
VLDLR-204ENST00000478776 PAPPAQ13219 1627 aa0.44□□□□□ -2.34
VLDLR-204ENST00000478776 XRN1Q8IZH2 1706 aaKnown RBP0.44□□□□□ -2.34
VLDLR-204ENST00000478776 CELSR2Q9HCU4 2923 aa0.44□□□□□ -2.34
VLDLR-204ENST00000478776 FANCAO15360 1455 aa0.43□□□□□ -2.34
VLDLR-204ENST00000478776 ABCA12Q86UK0 2595 aa0.43□□□□□ -2.34
VLDLR-204ENST00000478776 C7orf77A4D0Y5 90 aa0.43□□□□□ -2.34
VLDLR-204ENST00000478776 FAUP35544 74 aaKnown RBP0.43□□□□□ -2.34
VLDLR-204ENST00000478776 LINC01600Q96MT4 127 aa0.43□□□□□ -2.34
VLDLR-204ENST00000478776 BAZ1AQ9NRL2 1556 aaPredicted RBP0.43□□□□□ -2.34
VLDLR-204ENST00000478776 TULP4Q9NRJ4 1543 aa0.43□□□□□ -2.34
VLDLR-204ENST00000478776 AHCTF1Q8WYP5 2266 aa0.43□□□□□ -2.34
VLDLR-204ENST00000478776 POLA1P09884 1462 aaPredicted RBP0.42□□□□□ -2.34
VLDLR-204ENST00000478776 NRXN1Q9ULB1 1477 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 CACNA1EQ15878 2313 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 A0A0G2JMZ2 1700 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 A0A087WVE0 104 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 UQCRHLA0A096LP55 91 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 GYPAP02724 150 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 Q5BKY6 102 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 Q8IZM0 81 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 SHPRHQ149N8 1683 aa0.42□□□□□ -2.34
VLDLR-204ENST00000478776 IQSEC2Q5JU85 1478 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 PIGYQ3MUY2 71 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 FDCSPQ8NFU4 85 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 LCN9Q8WX39 176 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 V9GYS6 101 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 NHSL1Q5SYE7 1610 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 GPR98Q8WXG9 6306 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 MON2Q7Z3U7 1717 aa0.41□□□□□ -2.34
VLDLR-204ENST00000478776 TPRP12270 2363 aaKnown RBP0.4□□□□□ -2.34
VLDLR-204ENST00000478776 TRBV7-4A0A0J9YYF1 115 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 H3BQF6 201 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 Q9H521 79 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 CHD9Q3L8U1 2897 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 KIAA1551Q9HCM1 1747 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 ANK2Q01484 3957 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 ATP10BO94823 1461 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 NLRP1Q9C000 1473 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 PAPPA2Q9BXP8 1791 aa0.4□□□□□ -2.35
VLDLR-204ENST00000478776 CEP162Q5TB80 1403 aa0.39□□□□□ -2.35
VLDLR-204ENST00000478776 TARBP1Q13395 1621 aaKnown RBP0.39□□□□□ -2.35
VLDLR-204ENST00000478776 KNDC1Q76NI1 1749 aa0.39□□□□□ -2.35
VLDLR-204ENST00000478776 LINC00959A0A1B0GUT2 108 aa0.39□□□□□ -2.35
VLDLR-204ENST00000478776 ARMS2P0C7Q2 107 aa0.39□□□□□ -2.35
VLDLR-204ENST00000478776 HMGN3Q15651 99 aa0.39□□□□□ -2.35
VLDLR-204ENST00000478776 DEFB123Q8N688 67 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms