RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 MT1AP04731 61 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 HIST1H1DP16402 221 aaKnown RBP-0.68□□□□□ -2.52
HPS3-205ENST00000478525 Q6ZUT4 128 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 SMIM15Q7Z3B0 74 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 TTC9CQ8N5M4 171 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 PRO1933Q9H354 126 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 DYNLRB1Q9NP97 96 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 LINC01558Q9Y6Z2 57 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 HTTP42858 3142 aa-0.68□□□□□ -2.52
HPS3-205ENST00000478525 PBRM1Q86U86 1689 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 RIMS1Q86UR5 1692 aaKnown RBP-0.69□□□□□ -2.52
HPS3-205ENST00000478525 TULP4Q9NRJ4 1543 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 DNAH9Q9NYC9 4486 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 HCG22E2RYF7 251 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 AIF1LQ9BQI0 150 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 NAA60Q9H7X0 242 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 CCDC167Q9P0B6 97 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 APLNQ9ULZ1 77 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 RNF213Q63HN8 5207 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 MAGI1Q96QZ7 1491 aaPredicted RBP-0.69□□□□□ -2.52
HPS3-205ENST00000478525 DNAH2Q9P225 4427 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 RYR2Q92736 4967 aa-0.69□□□□□ -2.52
HPS3-205ENST00000478525 ANKRD30AQ9BXX3 1397 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 PTPN23Q9H3S7 1636 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 TNRC18O15417 2968 aaPredicted RBP-0.7□□□□□ -2.52
HPS3-205ENST00000478525 IGLC7A0M8Q6 106 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 M0R2Z0 102 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 CCL22O00626 93 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 TSPAN19P0C672 248 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 NEFHP12036 1026 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 BTG2P78543 158 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 COPZ2Q9P299 210 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 ARAP2Q8WZ64 1704 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 KIAA1551Q9HCM1 1747 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 RGPD2P0DJD1 1756 aa-0.7□□□□□ -2.52
HPS3-205ENST00000478525 DSPP15924 2871 aaKnown RBP-0.71□□□□□ -2.52
HPS3-205ENST00000478525 PRRC2CQ9Y520 2896 aaKnown RBP-0.71□□□□□ -2.52
HPS3-205ENST00000478525 I3L3M4 83 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 SFT2D2O95562 160 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 IGLC6P0CF74 106 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 GNG10P50151 68 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 UBA52P62987 128 aaKnown RBP-0.71□□□□□ -2.52
HPS3-205ENST00000478525 S100A7L2Q5SY68 101 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 AKAP14Q86UN6 197 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 SELENOSQ9BQE4 189 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 TMEM191AQ9H0A3 160 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 TPT1P8Q9HAU6 139 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 CRIPTQ9P021 101 aa-0.71□□□□□ -2.52
HPS3-205ENST00000478525 NIPBLQ6KC79 2804 aaeCLIP-0.71□□□□□ -2.52
HPS3-205ENST00000478525 MYOM1P52179 1685 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 XRN1Q8IZH2 1706 aaKnown RBP-0.72□□□□□ -2.52
HPS3-205ENST00000478525 SLIT1O75093 1534 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 ANKRD11Q6UB99 2663 aaPredicted RBP-0.72□□□□□ -2.52
HPS3-205ENST00000478525 C9orf92A6NGG3 77 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 K7ERU9 68 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 FABP1P07148 127 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 SCGB1A1P11684 91 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 G0S2P27469 103 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 UBE2D3P61077 147 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 UBE2D2P62837 147 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 SMCO1Q147U7 214 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 PLECQ15149 4684 aaKnown RBP-0.72□□□□□ -2.52
HPS3-205ENST00000478525 H1FX-AS1Q4G0G2 97 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 C10orf113Q5VZT2 155 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 FDCSPQ8NFU4 85 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 ARL11Q969Q4 196 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 FAM167A-AS1Q96KT0 104 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 NXT2Q9NPJ8 142 aaKnown RBP-0.72□□□□□ -2.52
HPS3-205ENST00000478525 UQCR10Q9UDW1 63 aa-0.72□□□□□ -2.52
HPS3-205ENST00000478525 PDE4DIPQ5VU43 2346 aa-0.72□□□□□ -2.53
HPS3-205ENST00000478525 LRRC37AA6NMS7 1700 aa-0.72□□□□□ -2.53
HPS3-205ENST00000478525 NUP188Q5SRE5 1749 aa-0.72□□□□□ -2.53
HPS3-205ENST00000478525 KIF20BQ96Q89 1820 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 WDR87Q6ZQQ6 2873 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 ZZEF1O43149 2961 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 ADAMTS12P58397 1594 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 VPS13DQ5THJ4 4388 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 PITX3O75364 302 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 MRPL54Q6P161 138 aaKnown RBP-0.73□□□□□ -2.53
HPS3-205ENST00000478525 CDC26Q8NHZ8 85 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 MYOZ3Q8TDC0 251 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 PPP3R2Q96LZ3 170 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 PFDN5Q99471 154 aa-0.73□□□□□ -2.53
HPS3-205ENST00000478525 SMG6Q86US8 1419 aaKnown RBP-0.73□□□□□ -2.53
HPS3-205ENST00000478525 HMGXB3Q12766 1538 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 CEP152O94986 1710 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 BCORQ6W2J9 1755 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 TRAV30A0A087WSZ9 112 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 FAM236AA0A1B0GUQ0 79 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 LINC00959A0A1B0GUT2 108 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 FAM236BA0A1B0GV22 79 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 HMGN4O00479 90 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 COPZ1P61923 177 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 SPRR4Q96PI1 79 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 CDKN2A-AS1Q9UH64 79 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 FAM186AA6NE01 2351 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 PKD1L2Q7Z442 2459 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 PRG4Q92954 1404 aaPredicted RBP-0.74□□□□□ -2.53
HPS3-205ENST00000478525 LYSTQ99698 3801 aa-0.74□□□□□ -2.53
HPS3-205ENST00000478525 CFTRP13569 1480 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms