RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SMAGPQ0VAQ4 97 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 WFDC2Q14508 124 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 STHQ8IWL8 128 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 CITED2Q99967 270 aaPredicted RBP3.55□□□□□ -1.84
SF3B6-202ENST00000478050 CHCHD7Q9BUK0 85 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 TIMM21Q9BVV7 248 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 UBE2D4Q9Y2X8 147 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 NOTCH3Q9UM47 2321 aa3.55□□□□□ -1.84
SF3B6-202ENST00000478050 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
SF3B6-202ENST00000478050 LOC107984156A0A0G2JMH3 177 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 A0A0J9YXY3 114 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 TRBV10-1A0A0K0K1A3 114 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 A4D1N5 150 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 CCL24O00175 119 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-30-3P0DP02 117 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 PSMB2P49721 201 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 ARL17AQ8IVW1 177 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 FAM104AQ969W3 186 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 SPANXDQ9BXN6 97 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 C16orf95Q9H693 158 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 SPANXCQ9NY87 97 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 XCL2Q9UBD3 114 aa3.54□□□□□ -1.84
SF3B6-202ENST00000478050 TSSC4Q9Y5U2 329 aaPredicted RBP3.54□□□□□ -1.84
SF3B6-202ENST00000478050 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
SF3B6-202ENST00000478050 TRRAPQ9Y4A5 3859 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-64A0A075B6Q5 118 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
SF3B6-202ENST00000478050 TRAV4A0A0B4J268 109 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
SF3B6-202ENST00000478050 K7EQD1 137 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 M0QXV9 152 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 CIDEAO60543 219 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 TIMM17BO60830 172 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 TCL1BO95988 128 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 IGHV3-33P01772 117 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 SCGB1A1P11684 91 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 AZU1P20160 251 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
SF3B6-202ENST00000478050 ETDBQ3ZM63 59 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 Q6ZUT4 128 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 FAM19A3Q7Z5A8 133 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 MUSTN1Q8IVN3 82 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 SBSPONQ8IVN8 264 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 C1orf158Q8N1D5 194 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 TMEM263Q8WUH6 116 aaKnown RBP3.53□□□□□ -1.84
SF3B6-202ENST00000478050 RPL36ALQ969Q0 106 aaKnown RBP3.53□□□□□ -1.84
SF3B6-202ENST00000478050 VSIG2Q96IQ7 327 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 FAM110AQ9BQ89 295 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 C1QTNF4Q9BXJ3 329 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 GEMIN7Q9H840 131 aaKnown RBP3.53□□□□□ -1.84
SF3B6-202ENST00000478050 NDUFA12Q9UI09 145 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 ERG28Q9UKR5 140 aa3.53□□□□□ -1.84
SF3B6-202ENST00000478050 IGLV5-45A0A087WSX0 123 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 TRGV1A0A0A0MS02 117 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 IGHV3-38A0A0C4DH36 116 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 PRM2P04554 102 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 SCGB1C2P0DMR2 95 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 IFITM1P13164 125 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 HERVK_113P63121 156 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 DAZ2Q13117 558 aaKnown RBP3.52□□□□□ -1.85
SF3B6-202ENST00000478050 MIAQ16674 131 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 ZFAND6Q6FIF0 208 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 CEMP1Q6PRD7 247 aaPredicted RBP3.52□□□□□ -1.85
SF3B6-202ENST00000478050 SH2D6Q7Z4S9 175 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 DAZ4Q86SG3 579 aaKnown RBP3.52□□□□□ -1.85
SF3B6-202ENST00000478050 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
SF3B6-202ENST00000478050 PPDPFLQ8WWR9 84 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 SIGMAR1Q99720 223 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 LITAFQ99732 161 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 ESM1Q9NQ30 184 aa3.52□□□□□ -1.85
SF3B6-202ENST00000478050 DAZ3Q9NR90 486 aaKnown RBP3.52□□□□□ -1.85
SF3B6-202ENST00000478050 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
SF3B6-202ENST00000478050 VWFP04275 2813 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 IGHV3OR16-12A0A075B7B8 117 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 TRAV8-3A0A0A6YYJ7 113 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 TRBV30A0A0K0K1B3 111 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 H7C423 109 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 NDUFA1O15239 70 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 NDUFA7O95182 113 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 IGLV1-51P01701 117 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 VPREB1P12018 145 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 ATXN8Q156A1 80 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 Q1RN00 199 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 RNASE13Q5GAN3 156 aaKnown RBP3.51□□□□□ -1.85
SF3B6-202ENST00000478050 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 TEN1Q86WV5 123 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 MTURNQ8N3F0 131 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 LINC01006Q8NI28 216 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 ZNF418Q8TF45 676 aaPredicted RBP3.51□□□□□ -1.85
SF3B6-202ENST00000478050 COPS9Q8WXC6 57 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 Q9UF83 564 aa3.51□□□□□ -1.85
SF3B6-202ENST00000478050 IGLV5-39A0A0G2JS06 123 aa3.5□□□□□ -1.85
SF3B6-202ENST00000478050 CIRBPQ14011 172 aaKnown RBP3.5□□□□□ -1.85
SF3B6-202ENST00000478050 Q6ZTI0 123 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms