RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NPYP01303 97 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 TRGC2P03986 189 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 P0DMU3 169 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 FAM231AP0DMU4 169 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 FAM231CP0DMU5 169 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 PMCHP20382 165 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 FCER1GP30273 86 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 TCTAP57738 103 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 RAB5BP61020 215 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 HERVK_113P61574 105 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 COTL1Q14019 142 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 TMEM97Q5BJF2 176 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 ZFAND6Q6FIF0 208 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 CEMP1Q6PRD7 247 aaPredicted RBP2.36□□□□□ -2.03
UBR3-209ENST00000477461 NEGR1Q7Z3B1 354 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 DAZ4Q86SG3 579 aaKnown RBP2.36□□□□□ -2.03
UBR3-209ENST00000477461 UBE2DNLQ8IWF7 75 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 ATP6V0E2Q8NHE4 81 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 RPL39LQ96EH5 51 aaKnown RBP2.36□□□□□ -2.03
UBR3-209ENST00000477461 YPEL4Q96NS1 127 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 C20orf78Q9BR46 151 aa2.36□□□□□ -2.03
UBR3-209ENST00000477461 TRAV8-6A0A0B4J262 113 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 C3orf84H3BNL1 204 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 I3L3M4 83 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 UBE2L6O14933 153 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 CCL18P55774 89 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 UBE2D3P61077 147 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 UBE2D2P62837 147 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 SMAGPQ0VAQ4 97 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 FA2HQ7L5A8 372 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 BAGE3Q86Y29 109 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 TMEM70Q9BUB7 260 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 SMIM2Q9BVW6 85 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 GTSF1LQ9H1H1 148 aa2.35□□□□□ -2.03
UBR3-209ENST00000477461 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
UBR3-209ENST00000477461 TRRAPQ9Y4A5 3859 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.34□□□□□ -2.03
UBR3-209ENST00000477461 TRBV25-1A0A075B6N4 114 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 IGHV1-24A0A0C4DH33 117 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 K7EMI3 77 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 HSBP1O75506 76 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 S100A6P06703 90 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 G0S2P27469 103 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
UBR3-209ENST00000477461 POLR2KP53803 58 aaKnown RBP2.34□□□□□ -2.03
UBR3-209ENST00000477461 SEC61GP60059 68 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 PKIAP61925 76 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 IQCJQ1A5X6 159 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 ORMDL2Q53FV1 153 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 RNASEKQ6P5S7 137 aaKnown RBP2.34□□□□□ -2.03
UBR3-209ENST00000477461 Q8N8P6 123 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 C18orf32Q8TCD1 76 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 DEFB104AQ8WTQ1 72 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 TMEM243Q9BU79 118 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 APLNQ9ULZ1 77 aa2.34□□□□□ -2.03
UBR3-209ENST00000477461 TENM3Q9P273 2699 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 A0A087WX48 190 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 TRBV6-8A0A0A6YYG3 113 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 TRBV27A0A0K0K1C4 114 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 LINC01549A6NIU2 74 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 TMEM262E9PQX1 116 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BKO60814 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BJP06899 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 LINC00614P0C842 121 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 LINC00694P0DN24 101 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BOP23527 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BBP33778 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 NDUFA6P56556 154 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BDP58876 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BCP62807 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 Q0VG73 95 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST2H2BEQ16778 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.33□□□□□ -2.04
UBR3-209ENST00000477461 LELP1Q5T871 98 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 LYPD5Q6UWN5 251 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 NIT1Q86X76 327 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BHQ93079 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 CHCHD1Q96BP2 118 aaKnown RBP2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BNQ99877 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 HIST1H2BMQ99879 126 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 CYSLTR1Q9Y271 337 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 MRPS16Q9Y3D3 137 aaKnown RBP2.33□□□□□ -2.04
UBR3-209ENST00000477461 NBEAL2Q6ZNJ1 2754 aa2.33□□□□□ -2.04
UBR3-209ENST00000477461 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.32□□□□□ -2.04
UBR3-209ENST00000477461 IGKV2-29A2NJV5 120 aaPredicted RBP2.32□□□□□ -2.04
UBR3-209ENST00000477461 SIVA1O15304 175 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 HBDP02042 147 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 CRPP02741 224 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
UBR3-209ENST00000477461 S100A2P29034 98 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 RPL13AP40429 203 aaKnown RBP2.32□□□□□ -2.04
UBR3-209ENST00000477461 ESRGQ1W209 222 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 NTM-AS1Q6ZSK4 140 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 OR5A1Q8NGJ0 315 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 SCGB3A1Q96QR1 104 aa2.32□□□□□ -2.04
UBR3-209ENST00000477461 LINC00588Q9Y4M8 146 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms