RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LYRM9A8MSI8 78 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 TRRAPQ9Y4A5 3859 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 APOC4P55056 127 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 GAGE6Q13070 117 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 WFDC2Q14508 124 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 FAM222AQ5U5X8 452 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 RNF183Q96D59 192 aa8.03□□□□□ -1.12
NUP188-205ENST00000477069 TRAV26-1A0A087WT03 109 aa8.02□□□□□ -1.12
NUP188-205ENST00000477069 DEFB135Q30KP9 77 aa8.02□□□□□ -1.12
NUP188-205ENST00000477069 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.12
NUP188-205ENST00000477069 G3V4G9 280 aa8.02□□□□□ -1.13
NUP188-205ENST00000477069 CMYA5Q8N3K9 4069 aa8.02□□□□□ -1.13
NUP188-205ENST00000477069 GYPEP15421 78 aa8.02□□□□□ -1.13
NUP188-205ENST00000477069 SFTA2Q6UW10 78 aa8.02□□□□□ -1.13
NUP188-205ENST00000477069 LOC107984156A0A0G2JMH3 177 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 ARL17AQ8IVW1 177 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 Q9H8V8 135 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 LYRM7Q5U5X0 104 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 Q8NAQ8 132 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 ATP6V0E2Q8NHE4 81 aa8.01□□□□□ -1.13
NUP188-205ENST00000477069 TEP1Q99973 2627 aaKnown RBP8.01□□□□□ -1.13
NUP188-205ENST00000477069 IGHV4-28A0A0C4DH34 117 aa8□□□□□ -1.13
NUP188-205ENST00000477069 TCL1BO95988 128 aa8□□□□□ -1.13
NUP188-205ENST00000477069 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
NUP188-205ENST00000477069 TEX48A0A1B0GUV7 120 aa8□□□□□ -1.13
NUP188-205ENST00000477069 IFITM1P13164 125 aa8□□□□□ -1.13
NUP188-205ENST00000477069 MTURNQ8N3F0 131 aa8□□□□□ -1.13
NUP188-205ENST00000477069 CHCHD5Q9BSY4 110 aa8□□□□□ -1.13
NUP188-205ENST00000477069 PSMB2P49721 201 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 ERG28Q9UKR5 140 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 TRBV20-1A0A075B6N2 111 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 PRSS2P07478 247 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 NOTCH2Q04721 2471 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 DEFB4AO15263 64 aa7.99□□□□□ -1.13
NUP188-205ENST00000477069 MIFP14174 115 aa7.98□□□□□ -1.13
NUP188-205ENST00000477069 DAND5Q8N907 189 aa7.98□□□□□ -1.13
NUP188-205ENST00000477069 CELA1Q9UNI1 258 aa7.98□□□□□ -1.13
NUP188-205ENST00000477069 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
NUP188-205ENST00000477069 IGHV4-30-4P0DP06 118 aa7.98□□□□□ -1.13
NUP188-205ENST00000477069 NPC2P61916 151 aa7.98□□□□□ -1.13
NUP188-205ENST00000477069 NBEAL2Q6ZNJ1 2754 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 TRBV30A0A0K0K1B3 111 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 CYSRT1A8MQ03 144 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 HERV-K104P63124 156 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
NUP188-205ENST00000477069 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 PPDPFQ9H3Y8 114 aa7.97□□□□□ -1.13
NUP188-205ENST00000477069 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.13
NUP188-205ENST00000477069 PAX4O43316 350 aa7.96□□□□□ -1.13
NUP188-205ENST00000477069 ETDBQ3ZM63 59 aa7.96□□□□□ -1.13
NUP188-205ENST00000477069 SCGB1A1P11684 91 aa7.96□□□□□ -1.14
NUP188-205ENST00000477069 CKS1BP61024 79 aa7.96□□□□□ -1.14
NUP188-205ENST00000477069 SOSTDC1Q6X4U4 206 aa7.96□□□□□ -1.14
NUP188-205ENST00000477069 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
NUP188-205ENST00000477069 A0A087WZ39 114 aa7.96□□□□□ -1.14
NUP188-205ENST00000477069 DNAH3Q8TD57 4116 aa7.95□□□□□ -1.14
NUP188-205ENST00000477069 H7C2G1 150 aa7.95□□□□□ -1.14
NUP188-205ENST00000477069 TRIAP1O43715 76 aa7.95□□□□□ -1.14
NUP188-205ENST00000477069 COX7B2Q8TF08 81 aa7.95□□□□□ -1.14
NUP188-205ENST00000477069 ATRQ13535 2644 aa7.95□□□□□ -1.14
NUP188-205ENST00000477069 A0A096LPF7 62 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 IGKV3OR2-268A0A0C4DH90 116 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 DAD1P61803 113 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 SIGMAR1Q99720 223 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 SCGB1C2P0DMR2 95 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 KRTAP24-1Q3LI83 254 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 ICOSQ9Y6W8 199 aa7.94□□□□□ -1.14
NUP188-205ENST00000477069 ATP5G1P05496 136 aa7.93□□□□□ -1.14
NUP188-205ENST00000477069 KRTAP10-11P60412 298 aa7.93□□□□□ -1.14
NUP188-205ENST00000477069 Q1RN00 199 aa7.93□□□□□ -1.14
NUP188-205ENST00000477069 ANK2Q01484 3957 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 M0QXV9 152 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 SPART-AS1P0CW21 52 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 TMEM262E9PQX1 116 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 RPL13AP40429 203 aaKnown RBP7.92□□□□□ -1.14
NUP188-205ENST00000477069 COPS9Q8WXC6 57 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 LINC01600Q96MT4 127 aa7.92□□□□□ -1.14
NUP188-205ENST00000477069 EGFEM1PQ0D2K5 195 aa7.91□□□□□ -1.14
NUP188-205ENST00000477069 OXLD1Q5BKU9 147 aa7.91□□□□□ -1.14
NUP188-205ENST00000477069 C5orf38Q86SI9 138 aa7.91□□□□□ -1.14
NUP188-205ENST00000477069 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
NUP188-205ENST00000477069 ATXN8Q156A1 80 aa7.9□□□□□ -1.14
NUP188-205ENST00000477069 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.14
NUP188-205ENST00000477069 FOXI1Q12951 378 aa7.9□□□□□ -1.15
NUP188-205ENST00000477069 SS18Q15532 418 aa7.9□□□□□ -1.15
NUP188-205ENST00000477069 TEN1Q86WV5 123 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 Q8N3U1 123 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 SLC25A20O43772 301 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 XCL1P47992 114 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 LINC01620Q4KN68 170 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 CARD19Q96LW7 228 aa7.89□□□□□ -1.15
NUP188-205ENST00000477069 C9JAW5 83 aa7.88□□□□□ -1.15
NUP188-205ENST00000477069 CLPSL2Q6UWE3 100 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms