RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 PANO1I0J062 215 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 PRH1P02810 166 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 MSMBP08118 114 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 CGB3P0DN86 165 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 CGB7P0DN87 165 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 MDKP21741 143 aaPredicted RBP2.36□□□□□ -2.03
ITGA4-208ENST00000476824 UBE2D3P61077 147 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 UBE2D2P62837 147 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 ZNF117Q03924 483 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 UBE2WQ96B02 151 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 C16orf74Q96GX8 76 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 PLA2G12AQ9BZM1 189 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 RPP21Q9H633 154 aaKnown RBP2.36□□□□□ -2.03
ITGA4-208ENST00000476824 ABRACLQ9P1F3 81 aa2.36□□□□□ -2.03
ITGA4-208ENST00000476824 RP1L1Q8IWN7 2480 aaPredicted RBP2.36□□□□□ -2.03
ITGA4-208ENST00000476824 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
ITGA4-208ENST00000476824 JMJD1CQ15652 2540 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 COL27A1Q8IZC6 1860 aaPredicted RBP2.35□□□□□ -2.03
ITGA4-208ENST00000476824 KIAA2026Q5HYC2 2103 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 FN1P02751 2386 aaKnown RBP2.35□□□□□ -2.03
ITGA4-208ENST00000476824 ANK2Q01484 3957 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 IGLV3-12A0A075B6K2 115 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 TRBV7-3A0A075B6L6 115 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 BPY2O14599 106 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 INSP01308 110 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 HMGN2P05204 90 aaKnown RBP2.35□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV1-8P0DP01 117 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
ITGA4-208ENST00000476824 NTM-AS1Q6ZSK4 140 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 VMO1Q7Z5L0 202 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 NDUFA11Q86Y39 141 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 DEFB124Q8NES8 71 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 PRO1854Q9UHT4 67 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 SVILO95425 2214 aa2.35□□□□□ -2.03
ITGA4-208ENST00000476824 RYR3Q15413 4870 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 NSD1Q96L73 2696 aaPredicted RBP2.34□□□□□ -2.03
ITGA4-208ENST00000476824 TRAV7A0A075B6U4 112 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 TRBV7-1A0A0A6YYK4 115 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 IGHV3-73A0A0B4J1V6 119 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 TRBV10-3A0A0K0K1G6 114 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 TRBV10-2A0A0K0K1G8 114 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 A6NED7 52 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 CEBPZOSA8MTT3 80 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 HCG22E2RYF7 251 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 ZNF861PO60384 105 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 SH2D1AO60880 128 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 CD24P25063 80 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 SUPT4H1P63272 117 aaKnown RBP2.34□□□□□ -2.03
ITGA4-208ENST00000476824 Q6ZS52 159 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 FAM223AQ8IWN6 122 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 CIRBP-AS1Q8TBR5 109 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 FAM167A-AS1Q96KT0 104 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 CMC2Q9NRP2 79 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 ZNF355PQ9NSJ1 428 aa2.34□□□□□ -2.03
ITGA4-208ENST00000476824 KMT2CQ8NEZ4 4911 aaKnown RBP2.34□□□□□ -2.04
ITGA4-208ENST00000476824 PLXNB1O43157 2135 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 COL6A5A8TX70 2615 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 IGLV11-55A0A075B6I3 123 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 IQCF6A8MYZ5 107 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 C16orf90A8MZG2 172 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 H3BVH4 76 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 LY6HO94772 140 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 IGLV1-51P01701 117 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 IGHV1-46P01743 117 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 IFI27P40305 119 aaPredicted RBP2.33□□□□□ -2.04
ITGA4-208ENST00000476824 FXYD2P54710 66 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 Q6JHZ5 121 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 ZNF826PQ6ZT77 177 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
ITGA4-208ENST00000476824 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 DYNAPQ8N1N2 210 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
ITGA4-208ENST00000476824 Q8N814 137 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 SPTSSBQ8NFR3 76 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 CDC42SE1Q9NRR8 79 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 MAP1AP78559 2803 aaPredicted RBP2.33□□□□□ -2.04
ITGA4-208ENST00000476824 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 ARID1AO14497 2285 aa2.33□□□□□ -2.04
ITGA4-208ENST00000476824 ACANP16112 2415 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 NACAE9PAV3 2078 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 TRBV25-1A0A075B6N4 114 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 IGHV1-3A0A0C4DH29 117 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 C11orf94C9JXX5 98 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 IGHV4-34P06331 123 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 COX6CP09669 75 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 RPL28P46779 137 aaKnown RBP2.32□□□□□ -2.04
ITGA4-208ENST00000476824 PLGLAQ15195 96 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 ATXN8Q156A1 80 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 NCBP2-AS2Q69YL0 99 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 ZNF818PQ6ZRF7 136 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 Q8IYB0 196 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 C20orf197Q8N268 126 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 FAM19A2Q8N3H0 131 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 Q8NDZ9 215 aa2.32□□□□□ -2.04
ITGA4-208ENST00000476824 DOCK11Q5JSL3 2073 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms