RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 C2orf66Q6UXQ4 117 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 NTM-AS1Q6ZSK4 140 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 NIT1Q86X76 327 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 TMEM141Q96I45 108 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
HLA-DMA-207ENST00000475627 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 CCL25O15444 150 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 ANGP03950 147 aaKnown RBP5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 GAGE6Q13070 117 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 TIMM17AQ99595 171 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
HLA-DMA-207ENST00000475627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 SERF1AO75920 110 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 RBX1P62877 108 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 SEC11AP67812 179 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 Q8N976 141 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 TOMM6Q96B49 74 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 SCGB3A1Q96QR1 104 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 MIEN1Q9BRT3 115 aa5.57□□□□□ -1.52
HLA-DMA-207ENST00000475627 TRAV8-4A0A0B4J246 113 aa5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 DLEU1O43261 78 aa5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 SRSF9Q13242 221 aaKnown RBP eCLIP5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 MIAQ16674 131 aa5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 MPV17L2Q567V2 206 aa5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
HLA-DMA-207ENST00000475627 NBDYA0A0U1RRE5 68 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 LCE6AA0A183 80 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGHV3-30P01768 117 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGHV3-33P01772 117 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGHV3-30-3P0DP02 117 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGHV3-30-5P0DP03 117 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 SS18Q15532 418 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
HLA-DMA-207ENST00000475627 DNAH7Q8WXX0 4024 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 IBA57-AS1B1ANH7 110 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 REG3AQ06141 175 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 DEFB104AQ8WTQ1 72 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 UBE2WQ96B02 151 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 CDC42SE2Q9NRR3 84 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
HLA-DMA-207ENST00000475627 A0A087WZ39 114 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 C20orf202A1L168 122 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGIPA6NJ69 53 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 PRSS1P07477 247 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 LINC00269Q8N2A0 174 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
HLA-DMA-207ENST00000475627 IGLV4-3A0A075B6K6 122 aa5.52□□□□□ -1.53
HLA-DMA-207ENST00000475627 PSCAO43653 123 aa5.52□□□□□ -1.53
HLA-DMA-207ENST00000475627 PMVKQ15126 192 aa5.52□□□□□ -1.53
HLA-DMA-207ENST00000475627 PMCHL1Q16048 86 aa5.52□□□□□ -1.53
HLA-DMA-207ENST00000475627 Q6ZUT4 128 aa5.52□□□□□ -1.53
HLA-DMA-207ENST00000475627 VAMP8Q9BV40 100 aa5.52□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 RPL24P83731 157 aaKnown RBP5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 C1orf134Q5TEV5 83 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 Q6ZVQ6 151 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 C6orf223Q8N319 242 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 Q9HAA7 133 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 TENM2Q9NT68 2774 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
HLA-DMA-207ENST00000475627 CSMD3Q7Z407 3707 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGKV2D-24A0A075B6R9 120 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 A0A096LNJ9 63 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 TRAV13-1A0A0B4J241 112 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 TRAV12-1A0A0B4J245 112 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 H3BRM9 83 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 CDK2AP2O75956 126 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 APOMO95445 188 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGLC3P0DOY3 106 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 HERVK_113P63121 156 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 COL5A1-AS1Q5SY13 56 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 BAALCQ8WXS3 180 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 AMELXQ99217 191 aa5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 DYNC2H1Q8NCM8 4307 aaKnown RBP5.5□□□□□ -1.53
HLA-DMA-207ENST00000475627 LINC00959A0A1B0GUT2 108 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 M0R2N4 97 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 PLNP26678 52 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 SPATA45Q537H7 98 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 Q6ZR54 194 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 CST9LQ9H4G1 147 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms