RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 CCL19Q99731 98 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 CYP4F30PQ9H0H9 118 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 UQCR10Q9UDW1 63 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 LINC00312Q9Y6C7 94 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 LRRC37A3O60309 1634 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 DIP2CQ9Y2E4 1556 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 PLIN4Q96Q06 1357 aa1.97□□□□□ -2.09
SRGAP3-205ENST00000475560 NEXMIFQ5QGS0 1516 aa1.96□□□□□ -2.09
SRGAP3-205ENST00000475560 ASXL1Q8IXJ9 1541 aa1.96□□□□□ -2.09
SRGAP3-205ENST00000475560 CHD3Q12873 2000 aaKnown RBP1.96□□□□□ -2.09
SRGAP3-205ENST00000475560 MUC3AQ02505 3323 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 ACACBO00763 2458 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 C1orf167Q5SNV9 1468 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 PXDNQ92626 1479 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 A0A087WWC5 75 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 H3BQ15 152 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 NCR3O14931 201 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 CAV3P56539 151 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 SSBP1Q04837 148 aaKnown RBP1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 ZNF56Q15929 161 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 VAMP8Q9BV40 100 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 RGPD1P0DJD0 1748 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 DOCK2Q92608 1830 aa1.96□□□□□ -2.1
SRGAP3-205ENST00000475560 INTS1Q8N201 2190 aaKnown RBP1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 XRN1Q8IZH2 1706 aaKnown RBP1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 TRBV7-1A0A0A6YYK4 115 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 KANTRA0A1W2PQU2 76 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 C7orf77A4D0Y5 90 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 SFTA3P0C7M3 94 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 IGLC1P0CG04 106 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 Q86TA4 180 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 TET1Q8NFU7 2136 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 PPP1R1CQ8WVI7 109 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 DPY30Q9C005 99 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 LINC00474Q9P2X8 69 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 CACFD1Q9UGQ2 172 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 AFDNP55196 1824 aaKnown RBP1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 PLCH1Q4KWH8 1693 aa1.95□□□□□ -2.1
SRGAP3-205ENST00000475560 NUP188Q5SRE5 1749 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 SAMD9LQ8IVG5 1584 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 CEP290O15078 2479 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 NINQ8N4C6 2090 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 K7EP34 96 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 EFNA4P52798 201 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 KLKP1Q107X0 134 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 LINC00575Q6W349 94 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 MYOZ3Q8TDC0 251 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 TSLPQ969D9 159 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 RGPD2P0DJD1 1756 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 DOCK1Q14185 1865 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 PLXNA1Q9UIW2 1896 aa1.94□□□□□ -2.1
SRGAP3-205ENST00000475560 MYO9AB2RTY4 2548 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 C5P01031 1676 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 CNOT1A5YKK6 2376 aaKnown RBP1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 PDCD11Q14690 1871 aaKnown RBP1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 IGLC7A0M8Q6 106 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 SNRPGP15A8MWD9 76 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 LINC00032P0C843 101 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 C10orf128Q5T292 105 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 FAM74A4Q5TZK3 123 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 DEFB123Q8N688 67 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 QSER1Q2KHR3 1735 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 NCOR2Q9Y618 2525 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 SBF2Q86WG5 1849 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 MRC1P22897 1456 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 CENPFP49454 3210 aa1.93□□□□□ -2.1
SRGAP3-205ENST00000475560 CITO14578 2027 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 SFT2D2O95562 160 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 CYB5AP00167 134 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 ELOF1P60002 83 aaKnown RBP1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 SEC11AP67812 179 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 ADIRFQ15847 76 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 SMIM5Q71RC9 77 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 FXYD6Q9H0Q3 95 aa1.92□□□□□ -2.1
SRGAP3-205ENST00000475560 PKD1L3Q7Z443 1732 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 UBR1Q8IWV7 1749 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 DDX60Q8IY21 1712 aaKnown RBP1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 HIVEP2P31629 2446 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 BPTFQ12830 3046 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 SPTAN1Q13813 2472 aaKnown RBP1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 RGPD4Q7Z3J3 1758 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 A0A087WTM6 91 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 A0A0D9SFI3 127 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 TRBV30A0A0K0K1B3 111 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 A0A1W2PPM0 123 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 UMAD1C9J7I0 102 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 MT-ATP8P03928 68 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 IGLC2P0DOY2 106 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 IGLC3P0DOY3 106 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 LYNX1P0DP58 116 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 TDRG1Q3Y452 100 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 ST20Q9HBF5 79 aa1.91□□□□□ -2.1
SRGAP3-205ENST00000475560 NPVFQ9HCQ7 196 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms