RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 NPC2P61916 151 aa8.91□□□□□ -0.98
RNF220-211ENST00000474956 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
RNF220-211ENST00000474956 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.98
RNF220-211ENST00000474956 LY6G6DO95868 133 aa8.9□□□□□ -0.98
RNF220-211ENST00000474956 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
RNF220-211ENST00000474956 B5MCH6 92 aa8.9□□□□□ -0.99
RNF220-211ENST00000474956 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 NDUFA7O95182 113 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 DNAJC30Q96LL9 226 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
RNF220-211ENST00000474956 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 GAGE7O76087 117 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 GAGE12FP0CL80 117 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 GAGE12GP0CL81 117 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 GAGE12IP0CL82 117 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 HILS1P60008 231 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 GAGE4Q13068 117 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 DEFB121Q5J5C9 76 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
RNF220-211ENST00000474956 NDUFA1O15239 70 aa8.88□□□□□ -0.99
RNF220-211ENST00000474956 TIRAPP58753 221 aa8.88□□□□□ -0.99
RNF220-211ENST00000474956 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
RNF220-211ENST00000474956 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
RNF220-211ENST00000474956 CDKN2A-AS1Q9UH64 79 aa8.88□□□□□ -0.99
RNF220-211ENST00000474956 IGLV5-45A0A087WSX0 123 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 LOC100131303A0A0U1RQF7 123 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 INAFM1C9JVW0 142 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 C16orf95Q9H693 158 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 PKD1L1Q8TDX9 2849 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 TMEM101Q96IK0 257 aa8.87□□□□□ -0.99
RNF220-211ENST00000474956 RS1O15537 224 aa8.86□□□□□ -0.99
RNF220-211ENST00000474956 IGLV1-51P01701 117 aa8.86□□□□□ -0.99
RNF220-211ENST00000474956 BEAN1Q3B7T3 259 aa8.86□□□□□ -0.99
RNF220-211ENST00000474956 DGAT2L7PQ6IED9 249 aa8.86□□□□□ -0.99
RNF220-211ENST00000474956 DAND5Q8N907 189 aa8.86□□□□□ -0.99
RNF220-211ENST00000474956 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
RNF220-211ENST00000474956 TRAV25A0A0B4J276 109 aa8.85□□□□□ -0.99
RNF220-211ENST00000474956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.85□□□□□ -0.99
RNF220-211ENST00000474956 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
RNF220-211ENST00000474956 CCDC179H3BU77 68 aa8.85□□□□□ -0.99
RNF220-211ENST00000474956 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
RNF220-211ENST00000474956 HERVK_113P63121 156 aa8.84□□□□□ -0.99
RNF220-211ENST00000474956 COPS9Q8WXC6 57 aa8.84□□□□□ -0.99
RNF220-211ENST00000474956 F8P00451 2351 aa8.84□□□□□ -0.99
RNF220-211ENST00000474956 NTM-AS1Q6ZSK4 140 aa8.83□□□□□ -1
RNF220-211ENST00000474956 Q9H8V8 135 aa8.83□□□□□ -1
RNF220-211ENST00000474956 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
RNF220-211ENST00000474956 COX6A2Q02221 97 aa8.82□□□□□ -1
RNF220-211ENST00000474956 COX7A2LO14548 114 aa8.82□□□□□ -1
RNF220-211ENST00000474956 ACYP1P07311 99 aa8.82□□□□□ -1
RNF220-211ENST00000474956 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
RNF220-211ENST00000474956 STAB1Q9NY15 2570 aa8.82□□□□□ -1
RNF220-211ENST00000474956 ANK2Q01484 3957 aa8.82□□□□□ -1
RNF220-211ENST00000474956 TRBV7-7A0A0K0K1E9 115 aa8.82□□□□□ -1
RNF220-211ENST00000474956 LINC00482Q8N8I6 264 aa8.82□□□□□ -1
RNF220-211ENST00000474956 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
RNF220-211ENST00000474956 FAM19A3Q7Z5A8 133 aa8.8□□□□□ -1
RNF220-211ENST00000474956 PF4P02776 101 aa8.8□□□□□ -1
RNF220-211ENST00000474956 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
RNF220-211ENST00000474956 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
RNF220-211ENST00000474956 FBN1P35555 2871 aaKnown RBP8.8□□□□□ -1
RNF220-211ENST00000474956 TRGV2A0A075B6R0 118 aa8.8□□□□□ -1
RNF220-211ENST00000474956 A0A0U1RRA0 63 aa8.79□□□□□ -1
RNF220-211ENST00000474956 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
RNF220-211ENST00000474956 K7EQD1 137 aa8.79□□□□□ -1
RNF220-211ENST00000474956 CSDC2Q9Y534 153 aaKnown RBP8.79□□□□□ -1
RNF220-211ENST00000474956 DEFB4AO15263 64 aa8.79□□□□□ -1
RNF220-211ENST00000474956 IMUPQ9GZP8 106 aa8.79□□□□□ -1
RNF220-211ENST00000474956 MEIG1Q5JSS6 88 aa8.78□□□□□ -1
RNF220-211ENST00000474956 SOSTDC1Q6X4U4 206 aa8.78□□□□□ -1
RNF220-211ENST00000474956 PRIMA1Q86XR5 153 aa8.78□□□□□ -1
RNF220-211ENST00000474956 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
RNF220-211ENST00000474956 TRACP01848 142 aa8.78□□□□□ -1
RNF220-211ENST00000474956 DEFB130BP0DP73 79 aa8.78□□□□□ -1
RNF220-211ENST00000474956 DEFB130AP0DP74 79 aa8.78□□□□□ -1
RNF220-211ENST00000474956 HERV-K104P63124 156 aa8.77□□□□□ -1.01
RNF220-211ENST00000474956 RPL36AP83881 106 aaKnown RBP8.76□□□□□ -1.01
RNF220-211ENST00000474956 RPL36ALQ969Q0 106 aaKnown RBP8.76□□□□□ -1.01
RNF220-211ENST00000474956 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
RNF220-211ENST00000474956 IGKV3OR2-268A0A0C4DH90 116 aa8.76□□□□□ -1.01
RNF220-211ENST00000474956 CHCHD5Q9BSY4 110 aa8.76□□□□□ -1.01
RNF220-211ENST00000474956 TRBV10-1A0A0K0K1A3 114 aa8.75□□□□□ -1.01
RNF220-211ENST00000474956 DAZ2Q13117 558 aaKnown RBP8.75□□□□□ -1.01
RNF220-211ENST00000474956 DAZ4Q86SG3 579 aaKnown RBP8.75□□□□□ -1.01
RNF220-211ENST00000474956 DAZ3Q9NR90 486 aaKnown RBP8.75□□□□□ -1.01
RNF220-211ENST00000474956 BAALC-AS2P0C853 105 aa8.75□□□□□ -1.01
RNF220-211ENST00000474956 LINC00643Q86TS7 51 aa8.75□□□□□ -1.01
RNF220-211ENST00000474956 MAST4O15021 2626 aa8.75□□□□□ -1.01
RNF220-211ENST00000474956 A0A096LPF7 62 aa8.74□□□□□ -1.01
RNF220-211ENST00000474956 F5H768 121 aa8.74□□□□□ -1.01
RNF220-211ENST00000474956 C16orf74Q96GX8 76 aa8.74□□□□□ -1.01
RNF220-211ENST00000474956 CDC42SE2Q9NRR3 84 aa8.74□□□□□ -1.01
RNF220-211ENST00000474956 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
RNF220-211ENST00000474956 FAM222AQ5U5X8 452 aa8.73□□□□□ -1.01
RNF220-211ENST00000474956 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
RNF220-211ENST00000474956 FAM236AA0A1B0GUQ0 79 aa8.72□□□□□ -1.01
RNF220-211ENST00000474956 FAM236BA0A1B0GV22 79 aa8.72□□□□□ -1.01
RNF220-211ENST00000474956 FHL2Q14192 279 aa8.72□□□□□ -1.01
RNF220-211ENST00000474956 TENM3Q9P273 2699 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms