RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 K7ERJ3 54 aa12.4□□□□□ -0.42
VARS2-206ENST00000473916 TM2D2Q9BX73 214 aa12.4□□□□□ -0.42
VARS2-206ENST00000473916 COX11Q9Y6N1 276 aa12.4□□□□□ -0.42
VARS2-206ENST00000473916 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
VARS2-206ENST00000473916 H3BRM9 83 aa12.39□□□□□ -0.43
VARS2-206ENST00000473916 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
VARS2-206ENST00000473916 TAL2Q16559 108 aa12.38□□□□□ -0.43
VARS2-206ENST00000473916 TM2D3Q9BRN9 247 aa12.38□□□□□ -0.43
VARS2-206ENST00000473916 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 A0A1B0GUV1 79 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 A6NDN8 102 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 C11orf45Q8TAV5 145 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 RAB37Q96AX2 223 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 NAA38Q9BRA0 125 aaKnown RBP12.37□□□□□ -0.43
VARS2-206ENST00000473916 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
VARS2-206ENST00000473916 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 A0A0J9YXY3 114 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
VARS2-206ENST00000473916 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
VARS2-206ENST00000473916 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
VARS2-206ENST00000473916 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
VARS2-206ENST00000473916 LYPD5Q6UWN5 251 aa12.34□□□□□ -0.43
VARS2-206ENST00000473916 LINC00269Q8N2A0 174 aa12.34□□□□□ -0.43
VARS2-206ENST00000473916 LELP1Q5T871 98 aa12.33□□□□□ -0.43
VARS2-206ENST00000473916 DEFB131BA0A096LNP1 70 aa12.33□□□□□ -0.44
VARS2-206ENST00000473916 IGHV3OR16-9A0A0B4J2B5 98 aa12.33□□□□□ -0.44
VARS2-206ENST00000473916 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
VARS2-206ENST00000473916 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
VARS2-206ENST00000473916 LITAFQ99732 161 aa12.33□□□□□ -0.44
VARS2-206ENST00000473916 SPANXB1Q9NS25 103 aaPredicted RBP12.33□□□□□ -0.44
VARS2-206ENST00000473916 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
VARS2-206ENST00000473916 XCL1P47992 114 aa12.32□□□□□ -0.44
VARS2-206ENST00000473916 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
VARS2-206ENST00000473916 ADAMTSL4-AS1Q5T5F5 129 aa12.32□□□□□ -0.44
VARS2-206ENST00000473916 SH2D6Q7Z4S9 175 aa12.32□□□□□ -0.44
VARS2-206ENST00000473916 CCL25O15444 150 aa12.31□□□□□ -0.44
VARS2-206ENST00000473916 ZNF625Q96I27 306 aaPredicted RBP12.31□□□□□ -0.44
VARS2-206ENST00000473916 CBY1Q9Y3M2 126 aa12.31□□□□□ -0.44
VARS2-206ENST00000473916 NDUFA1O15239 70 aa12.3□□□□□ -0.44
VARS2-206ENST00000473916 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
VARS2-206ENST00000473916 Q9H8V8 135 aa12.3□□□□□ -0.44
VARS2-206ENST00000473916 IGLV10-54A0A075B6I4 117 aa12.3□□□□□ -0.44
VARS2-206ENST00000473916 DNAH9Q9NYC9 4486 aa12.29□□□□□ -0.44
VARS2-206ENST00000473916 H3BNG1 76 aa12.29□□□□□ -0.44
VARS2-206ENST00000473916 H3BUT2 72 aa12.29□□□□□ -0.44
VARS2-206ENST00000473916 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
VARS2-206ENST00000473916 REG3AQ06141 175 aa12.28□□□□□ -0.44
VARS2-206ENST00000473916 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
VARS2-206ENST00000473916 DAND5Q8N907 189 aa12.28□□□□□ -0.44
VARS2-206ENST00000473916 A0A087WZ39 114 aa12.27□□□□□ -0.44
VARS2-206ENST00000473916 TMEM238C9JI98 176 aa12.27□□□□□ -0.44
VARS2-206ENST00000473916 SS18Q15532 418 aa12.27□□□□□ -0.44
VARS2-206ENST00000473916 TOMM7Q9P0U1 55 aa12.27□□□□□ -0.44
VARS2-206ENST00000473916 IGHV3-33P01772 117 aa12.27□□□□□ -0.45
VARS2-206ENST00000473916 NPC2P61916 151 aa12.27□□□□□ -0.45
VARS2-206ENST00000473916 VAMP3Q15836 100 aa12.27□□□□□ -0.45
VARS2-206ENST00000473916 ESRGQ1W209 222 aa12.27□□□□□ -0.45
VARS2-206ENST00000473916 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
VARS2-206ENST00000473916 STAB2Q8WWQ8 2551 aa12.26□□□□□ -0.45
VARS2-206ENST00000473916 A0A1B0GWB2 263 aa12.26□□□□□ -0.45
VARS2-206ENST00000473916 DNHD1Q96M86 4753 aa12.26□□□□□ -0.45
VARS2-206ENST00000473916 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
VARS2-206ENST00000473916 EIF4EBP3O60516 100 aaPredicted RBP12.25□□□□□ -0.45
VARS2-206ENST00000473916 COX7B2Q8TF08 81 aa12.25□□□□□ -0.45
VARS2-206ENST00000473916 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
VARS2-206ENST00000473916 APOMO95445 188 aa12.25□□□□□ -0.45
VARS2-206ENST00000473916 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
VARS2-206ENST00000473916 A4D1N5 150 aa12.23□□□□□ -0.45
VARS2-206ENST00000473916 PRSS2P07478 247 aa12.23□□□□□ -0.45
VARS2-206ENST00000473916 CFC1BP0CG36 223 aa12.22□□□□□ -0.45
VARS2-206ENST00000473916 CFC1P0CG37 223 aa12.22□□□□□ -0.45
VARS2-206ENST00000473916 TMEM238LA0A1B0GVL6 79 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 A6NJY4 79 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 IGLL5B9A064 214 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 MIAQ16674 131 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 C21orf62-AS1Q17RA5 79 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 ENHOQ6UWT2 76 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
VARS2-206ENST00000473916 TRAV10A0A0B4J240 114 aa12.21□□□□□ -0.46
VARS2-206ENST00000473916 PCP4P48539 62 aa12.2□□□□□ -0.46
VARS2-206ENST00000473916 CD164L2Q6UWJ8 174 aa12.2□□□□□ -0.46
VARS2-206ENST00000473916 PRR34Q9NV39 138 aa12.2□□□□□ -0.46
VARS2-206ENST00000473916 A0A1W2PPM0 123 aa12.2□□□□□ -0.46
VARS2-206ENST00000473916 TIMM17BO60830 172 aa12.19□□□□□ -0.46
VARS2-206ENST00000473916 FOXI1Q12951 378 aa12.19□□□□□ -0.46
VARS2-206ENST00000473916 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
VARS2-206ENST00000473916 MEIG1Q5JSS6 88 aa12.18□□□□□ -0.46
VARS2-206ENST00000473916 PGPEP1Q9NXJ5 209 aa12.18□□□□□ -0.46
VARS2-206ENST00000473916 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
VARS2-206ENST00000473916 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
VARS2-206ENST00000473916 COX7A2LO14548 114 aa12.17□□□□□ -0.46
VARS2-206ENST00000473916 SFTA2Q6UW10 78 aa12.17□□□□□ -0.46
VARS2-206ENST00000473916 UBE2WQ96B02 151 aa12.17□□□□□ -0.46
VARS2-206ENST00000473916 C2orf82Q6UX34 121 aa12.16□□□□□ -0.46
VARS2-206ENST00000473916 TSPAN13O95857 204 aa12.16□□□□□ -0.46
VARS2-206ENST00000473916 HERV-K104P63124 156 aa12.16□□□□□ -0.46
VARS2-206ENST00000473916 SOSTDC1Q6X4U4 206 aa12.16□□□□□ -0.46
VARS2-206ENST00000473916 CIRBPQ14011 172 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms