RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 C9orf153Q5TBE3 101 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 ZNF625Q96I27 306 aaPredicted RBP7.82□□□□□ -1.16
C9orf3-214ENST00000473778 MTORP42345 2549 aa7.82□□□□□ -1.16
C9orf3-214ENST00000473778 TRAV25A0A0B4J276 109 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 LRRC75A-AS1Q8N1F1 130 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 LINC01600Q96MT4 127 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 ESM1Q9NQ30 184 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 TRBV7-7A0A0K0K1E9 115 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 J3KT08 172 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 WIPF1O43516 503 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 ZNF843Q8N446 348 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 CITED2Q99967 270 aaPredicted RBP7.81□□□□□ -1.16
C9orf3-214ENST00000473778 WFDC10AQ9H1F0 79 aa7.81□□□□□ -1.16
C9orf3-214ENST00000473778 A0A0U1RRA0 63 aa7.8□□□□□ -1.16
C9orf3-214ENST00000473778 H7C423 109 aa7.8□□□□□ -1.16
C9orf3-214ENST00000473778 GIG44P09565 113 aaPredicted RBP7.8□□□□□ -1.16
C9orf3-214ENST00000473778 TIRAPP58753 221 aa7.8□□□□□ -1.16
C9orf3-214ENST00000473778 FAM19A5Q7Z5A7 132 aaPredicted RBP7.8□□□□□ -1.16
C9orf3-214ENST00000473778 STHQ8IWL8 128 aa7.8□□□□□ -1.16
C9orf3-214ENST00000473778 ANK3Q12955 4377 aaKnown RBP7.8□□□□□ -1.16
C9orf3-214ENST00000473778 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 DNAJC9-AS1A6NH13 148 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 NDUFA1O15239 70 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 Q9H8V8 135 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 PDZD2O15018 2839 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 FAM236AA0A1B0GUQ0 79 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 FAM236BA0A1B0GV22 79 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 PLA2G2AP14555 144 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
C9orf3-214ENST00000473778 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
C9orf3-214ENST00000473778 HERVK_113P63121 156 aa7.78□□□□□ -1.16
C9orf3-214ENST00000473778 DGAT2L7PQ6IED9 249 aa7.78□□□□□ -1.16
C9orf3-214ENST00000473778 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
C9orf3-214ENST00000473778 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
C9orf3-214ENST00000473778 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
C9orf3-214ENST00000473778 A0A1B0GX51 115 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 F5H768 121 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 K7EQD1 137 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 CCL24O00175 119 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 TIMM17BO60830 172 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 UQCRQO14949 82 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 OR13C6PQ8NH95 151 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 LINC00308Q8TCZ7 52 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 NOP10Q9NPE3 64 aaKnown RBP7.77□□□□□ -1.17
C9orf3-214ENST00000473778 ITPR2Q14571 2701 aa7.77□□□□□ -1.17
C9orf3-214ENST00000473778 HIST2H2BCQ6DN03 193 aa7.76□□□□□ -1.17
C9orf3-214ENST00000473778 J3QKU1 62 aa7.76□□□□□ -1.17
C9orf3-214ENST00000473778 LST1O00453 97 aa7.76□□□□□ -1.17
C9orf3-214ENST00000473778 CDC42SE2Q9NRR3 84 aa7.76□□□□□ -1.17
C9orf3-214ENST00000473778 FN1P02751 2386 aaKnown RBP7.75□□□□□ -1.17
C9orf3-214ENST00000473778 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
C9orf3-214ENST00000473778 LINC00526Q96FQ7 95 aa7.75□□□□□ -1.17
C9orf3-214ENST00000473778 IMUPQ9GZP8 106 aa7.75□□□□□ -1.17
C9orf3-214ENST00000473778 KLK5Q9Y337 293 aaPredicted RBP7.75□□□□□ -1.17
C9orf3-214ENST00000473778 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
C9orf3-214ENST00000473778 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
C9orf3-214ENST00000473778 H3BT86 120 aa7.74□□□□□ -1.17
C9orf3-214ENST00000473778 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
C9orf3-214ENST00000473778 NBEAL2Q6ZNJ1 2754 aa7.74□□□□□ -1.17
C9orf3-214ENST00000473778 TRBV10-1A0A0K0K1A3 114 aa7.74□□□□□ -1.17
C9orf3-214ENST00000473778 DEFB121Q5J5C9 76 aa7.74□□□□□ -1.17
C9orf3-214ENST00000473778 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
C9orf3-214ENST00000473778 VWFP04275 2813 aa7.73□□□□□ -1.17
C9orf3-214ENST00000473778 DAZ2Q13117 558 aaKnown RBP7.73□□□□□ -1.17
C9orf3-214ENST00000473778 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
C9orf3-214ENST00000473778 TMEM86BQ8N661 226 aa7.73□□□□□ -1.17
C9orf3-214ENST00000473778 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
C9orf3-214ENST00000473778 COX6CP09669 75 aa7.73□□□□□ -1.17
C9orf3-214ENST00000473778 RPS28P62857 69 aaKnown RBP7.73□□□□□ -1.17
C9orf3-214ENST00000473778 PRIMA1Q86XR5 153 aa7.73□□□□□ -1.17
C9orf3-214ENST00000473778 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
C9orf3-214ENST00000473778 CYSRT1A8MQ03 144 aa7.71□□□□□ -1.17
C9orf3-214ENST00000473778 CSNK1G2-AS1Q8NCQ2 148 aa7.71□□□□□ -1.17
C9orf3-214ENST00000473778 LINC01006Q8NI28 216 aa7.71□□□□□ -1.17
C9orf3-214ENST00000473778 ATP5G1P05496 136 aa7.71□□□□□ -1.18
C9orf3-214ENST00000473778 KRTAP1-1Q07627 177 aa7.71□□□□□ -1.18
C9orf3-214ENST00000473778 CIRBPQ14011 172 aaKnown RBP7.71□□□□□ -1.18
C9orf3-214ENST00000473778 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.18
C9orf3-214ENST00000473778 IGLV4-60A0A075B6I1 120 aa7.7□□□□□ -1.18
C9orf3-214ENST00000473778 ACYP1P07311 99 aa7.7□□□□□ -1.18
C9orf3-214ENST00000473778 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
C9orf3-214ENST00000473778 TRGV2A0A075B6R0 118 aa7.69□□□□□ -1.18
C9orf3-214ENST00000473778 COX7CP15954 63 aa7.69□□□□□ -1.18
C9orf3-214ENST00000473778 TMEM243Q9BU79 118 aa7.69□□□□□ -1.18
C9orf3-214ENST00000473778 HECTD1Q9ULT8 2610 aa7.69□□□□□ -1.18
C9orf3-214ENST00000473778 IGKV3OR2-268A0A0C4DH90 116 aa7.69□□□□□ -1.18
C9orf3-214ENST00000473778 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
C9orf3-214ENST00000473778 COX7A2LO14548 114 aa7.68□□□□□ -1.18
C9orf3-214ENST00000473778 IGLV1-51P01701 117 aa7.68□□□□□ -1.18
C9orf3-214ENST00000473778 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
C9orf3-214ENST00000473778 CRYGAP11844 174 aa7.68□□□□□ -1.18
C9orf3-214ENST00000473778 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
C9orf3-214ENST00000473778 C16orf74Q96GX8 76 aa7.68□□□□□ -1.18
C9orf3-214ENST00000473778 UBE2L6O14933 153 aa7.67□□□□□ -1.18
C9orf3-214ENST00000473778 IGKV2-28A0A075B6P5 120 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms