RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LY6G6DO95868 133 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 FAM74A4Q5TZK3 123 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 NPBQ8NG41 125 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 CYP4F30PQ9H0H9 118 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 ASXL3Q9C0F0 2248 aa3.56□□□□□ -1.84
TMEM39A-206ENST00000473684 C16orf90A8MZG2 172 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 SMIM1B2RUZ4 78 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 MUC4Q99102 2169 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 H3BQ85 93 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 Q5VV11 94 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 Q6ZTI0 123 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 Q8N814 137 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 SPATA3Q8NHX4 192 aa3.55□□□□□ -1.84
TMEM39A-206ENST00000473684 TRBV6-8A0A0A6YYG3 113 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 A8MUN3 132 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 PSCAO43653 123 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV1-46P01743 117 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 SPINK14Q6IE38 97 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 ESM1Q9NQ30 184 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 ZNF292O60281 2723 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 REV3LO60673 3130 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 F5P12259 2224 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 KLLNB2CW77 178 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 K7EQG2 157 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 CCL4P13236 92 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 KLK9Q2XQG4 91 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 RNASE13Q5GAN3 156 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 KLK9Q9UKQ9 250 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV3-23P01764 117 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 NKAPP1Q8N9T2 125 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 CHCHD7Q9BUK0 85 aa3.54□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV3-16A0A0C4DH30 117 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 LCE6AA0A183 80 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 NTM-AS1Q6ZSK4 140 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 XIRP2A4UGR9 3374 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 COL6A3P12111 3177 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 IGHV3OR16-8A0A075B7F1 116 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 HCG22E2RYF7 251 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 LY6HO94772 140 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
TMEM39A-206ENST00000473684 OTOGLQ3ZCN5 2332 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV3-66A0A0C4DH42 116 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 TRBV6-4A0A1B0GX49 114 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 HIGD2AQ9BW72 106 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 KAAG1Q9UBP8 84 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 MED13Q9UHV7 2174 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 LOC100131303A0A0U1RQF7 123 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 LRCOL1A6NCL2 159 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 CCL18P55774 89 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 COX6A2Q02221 97 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 CCL17Q92583 94 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 PRUNE2Q8WUY3 3088 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV3-35A0A0C4DH35 117 aa3.52□□□□□ -1.85
TMEM39A-206ENST00000473684 LINC00467Q9BRT7 94 aa3.51□□□□□ -1.85
TMEM39A-206ENST00000473684 SZT2Q5T011 3432 aa3.51□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV3OR16-12A0A075B7B8 117 aa3.51□□□□□ -1.85
TMEM39A-206ENST00000473684 A8MU10 97 aa3.51□□□□□ -1.85
TMEM39A-206ENST00000473684 LPAL2Q16609 132 aa3.51□□□□□ -1.85
TMEM39A-206ENST00000473684 CEP290O15078 2479 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 CHD7Q9P2D1 2997 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV3-74A0A0B4J1X5 117 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 LINC00158P58513 81 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 CNEP1R1Q8N9A8 125 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 MUC6Q6W4X9 2439 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 PTPRQQ9UMZ3 2332 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 NDUFB1O75438 58 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV4-31P0DP07 118 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 DSCR9P59020 149 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 ELOF1P60002 83 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 DEFB114Q30KQ6 69 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 ZCCHC13Q8WW36 166 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
TMEM39A-206ENST00000473684 DNAJC13O75165 2243 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV7-81A0A0B4J1V7 117 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 K7EQD1 137 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 DEFB119Q8N690 84 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 COX7B2Q8TF08 81 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 U3KQA8 63 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 WDR87Q6ZQQ6 2873 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 UNC80Q8N2C7 3258 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV3-49A0A0A0MS15 119 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 IGKV4-1P06312 121 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 LYPD2Q6UXB3 125 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 DEFB124Q8NES8 71 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 MUC7Q8TAX7 377 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 DPM3Q9P2X0 92 aa3.49□□□□□ -1.85
TMEM39A-206ENST00000473684 IGHV4-38-2P0DP08 117 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 COX7A1P24310 79 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 FAM186AA6NE01 2351 aa3.48□□□□□ -1.85
TMEM39A-206ENST00000473684 A0A096LNT2 108 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms