RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SLURP1P55000 103 aa4.4□□□□□ -1.71
HERC4-209ENST00000473533 Q6ZSN1 163 aa4.4□□□□□ -1.71
HERC4-209ENST00000473533 IL17DQ8TAD2 202 aa4.4□□□□□ -1.71
HERC4-209ENST00000473533 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
HERC4-209ENST00000473533 C16orf74Q96GX8 76 aa4.4□□□□□ -1.71
HERC4-209ENST00000473533 A8MZ25 164 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 FSHBP01225 129 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 COX6A2Q02221 97 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 GAGE2AQ6NT46 116 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 SND1-IT1Q9HBX3 110 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 TRBV6-4A0A1B0GX49 114 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 F5H768 121 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 KHDC1LQ5JSQ8 128 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 Q6JHZ5 121 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 C10orf99Q6UWK7 81 aa4.39□□□□□ -1.71
HERC4-209ENST00000473533 NDUFA7O95182 113 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 COX7CP15954 63 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 ATP5EP2Q5VTU8 51 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 ACANP16112 2415 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 CELSR2Q9HCU4 2923 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 Q6ZSV7 163 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 LINC00158P58513 81 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 LRRC75A-AS1Q8N1F1 130 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
HERC4-209ENST00000473533 A0A1W2PRX2 142 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 H3BQ85 93 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 MIR7-3HGQ8N6C7 128 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 FLNCQ14315 2725 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 TRGV2A0A075B6R0 118 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 A0A0U1RRA0 63 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 J3KT08 172 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 ORMDL1Q9P0S3 153 aa4.37□□□□□ -1.71
HERC4-209ENST00000473533 CRYGAP11844 174 aa4.36□□□□□ -1.71
HERC4-209ENST00000473533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.36□□□□□ -1.71
HERC4-209ENST00000473533 TRGV4A0A0C4DH28 118 aa4.36□□□□□ -1.71
HERC4-209ENST00000473533 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
HERC4-209ENST00000473533 C1orf158Q8N1D5 194 aa4.36□□□□□ -1.71
HERC4-209ENST00000473533 MUC7Q8TAX7 377 aa4.36□□□□□ -1.71
HERC4-209ENST00000473533 FBN2P35556 2912 aa4.36□□□□□ -1.71
HERC4-209ENST00000473533 LINC00694P0DN24 101 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
HERC4-209ENST00000473533 KLK5Q9Y337 293 aaPredicted RBP4.35□□□□□ -1.71
HERC4-209ENST00000473533 SETXQ7Z333 2677 aaKnown RBP4.35□□□□□ -1.71
HERC4-209ENST00000473533 A0A087WZ39 114 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 A0A096LNT2 108 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
HERC4-209ENST00000473533 SS18Q15532 418 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 DEFB136Q30KP8 78 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 ODF3L2Q3SX64 289 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 NTM-AS1Q6ZSK4 140 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 OBSCN-AS1Q96MR7 158 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 TOMM7Q9P0U1 55 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 NF1P21359 2839 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 NIPBLQ6KC79 2804 aaeCLIP4.35□□□□□ -1.715e-6■■■■■ 32.2
HERC4-209ENST00000473533 PAX4O43316 350 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 GHRHP01286 108 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 SMIM11BQ8TCY0 68 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 NBEAL2Q6ZNJ1 2754 aa4.35□□□□□ -1.71
HERC4-209ENST00000473533 TMEM258P61165 79 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 CFAP161Q6P656 301 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 Q6ZTI0 123 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 C6orf226Q5I0X4 101 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 SMCR5Q8TEV8 140 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 Q9UF83 564 aa4.34□□□□□ -1.71
HERC4-209ENST00000473533 TMEM256-PLSCR3K7ERE1 68 aa4.34□□□□□ -1.72
HERC4-209ENST00000473533 LY6G6DO95868 133 aa4.34□□□□□ -1.72
HERC4-209ENST00000473533 COX17Q14061 63 aa4.34□□□□□ -1.72
HERC4-209ENST00000473533 LINC00337Q8N6G1 96 aa4.34□□□□□ -1.72
HERC4-209ENST00000473533 NOP10Q9NPE3 64 aaKnown RBP4.34□□□□□ -1.72
HERC4-209ENST00000473533 NDUFC2O95298 119 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 CCL18P55774 89 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 Q8IZM0 81 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 FAM218AQ96MZ4 157 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 IGHV3OR16-9A0A0B4J2B5 98 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 hADV29S1A0JD25 119 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 CCL24O00175 119 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 BCE1O60756 84 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 GCN1Q92616 2671 aaKnown RBP4.33□□□□□ -1.72
HERC4-209ENST00000473533 LECT2O14960 151 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 CCKP06307 115 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 NRGNQ92686 78 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 Q9HAA7 133 aa4.33□□□□□ -1.72
HERC4-209ENST00000473533 IGKV2-28A0A075B6P5 120 aa4.32□□□□□ -1.72
HERC4-209ENST00000473533 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
HERC4-209ENST00000473533 IGKV2D-28P01615 120 aa4.32□□□□□ -1.72
HERC4-209ENST00000473533 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
HERC4-209ENST00000473533 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
HERC4-209ENST00000473533 FLNBO75369 2602 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms