RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 FAIMQ9NVQ4 179 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 HSPG2P98160 4391 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 HMGXB3Q12766 1538 aa-0.23□□□□□ -2.45
COPS3-206ENST00000471414 PKD1L1Q8TDX9 2849 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 GNG11P61952 73 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 WHAMMP3Q1A5X7 153 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 FAM223AQ8IWN6 122 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 DEFB123Q8N688 67 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 FAM167A-AS1Q96KT0 104 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 IER3IP1Q9Y5U9 82 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 SCAPERQ9BY12 1400 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 POLA1P09884 1462 aaPredicted RBP-0.24□□□□□ -2.45
COPS3-206ENST00000471414 EHBP1L1Q8N3D4 1523 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 NRKQ7Z2Y5 1582 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 SCN7AQ01118 1682 aa-0.24□□□□□ -2.45
COPS3-206ENST00000471414 GNG4P50150 75 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 C10orf113Q5VZT2 155 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 ARL2-SNX15V9GYD0 113 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 GAPVD1Q14C86 1478 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 MAGI1Q96QZ7 1491 aaPredicted RBP-0.25□□□□□ -2.45
COPS3-206ENST00000471414 TULP4Q9NRJ4 1543 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 DIP2CQ9Y2E4 1556 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 MUC12Q9UKN1 5478 aa-0.25□□□□□ -2.45
COPS3-206ENST00000471414 SPTBN1Q01082 2364 aaKnown RBP-0.26□□□□□ -2.45
COPS3-206ENST00000471414 NUP188Q5SRE5 1749 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 TOP2BQ02880 1626 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 F6UZH7 168 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 K7EQZ3 153 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 SPRR1BP22528 89 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 UBA52P62987 128 aaKnown RBP-0.26□□□□□ -2.45
COPS3-206ENST00000471414 PPP3R1P63098 170 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 SARNPP82979 210 aaKnown RBP-0.26□□□□□ -2.45
COPS3-206ENST00000471414 Q0VG73 95 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 SVBPQ8N300 66 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 CHD6Q8TD26 2715 aa-0.26□□□□□ -2.45
COPS3-206ENST00000471414 TNXBP22105 4242 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 ALMS1Q8TCU4 4167 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 MAPKBP1O60336 1514 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 TRBV7-4A0A0J9YYF1 115 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 CORTO00230 105 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 UBE2D3P61077 147 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 UBE2D2P62837 147 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 KRTAP6-1Q3LI64 71 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 MANBALQ9NQG1 85 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 FAT2Q9NYQ8 4349 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 NSD1Q96L73 2696 aaPredicted RBP-0.27□□□□□ -2.45
COPS3-206ENST00000471414 SPHKAPQ2M3C7 1700 aa-0.27□□□□□ -2.45
COPS3-206ENST00000471414 LRP2P98164 4655 aa-0.28□□□□□ -2.45
COPS3-206ENST00000471414 CSPG4Q6UVK1 2322 aa-0.28□□□□□ -2.45
COPS3-206ENST00000471414 NAP1L6A6NFF2 107 aa-0.28□□□□□ -2.45
COPS3-206ENST00000471414 COX6CP09669 75 aa-0.28□□□□□ -2.45
COPS3-206ENST00000471414 C2orf88Q9BSF0 95 aa-0.28□□□□□ -2.45
COPS3-206ENST00000471414 ARHGAP5Q13017 1502 aa-0.28□□□□□ -2.45
COPS3-206ENST00000471414 ADGRL2O95490 1459 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 MRC2Q9UBG0 1479 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 CHD1O14646 1710 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 LINC00959A0A1B0GUT2 108 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 TRAPPC2P0DI81 140 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 TRAPPC2BP0DI82 140 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 S100A1P23297 94 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 FDCSPQ8NFU4 85 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 TMEM203Q969S6 136 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 LINC01600Q96MT4 127 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 PRO1933Q9H354 126 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 PRO1854Q9UHT4 67 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 GNG8Q9UK08 70 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 KIAA0556O60303 1618 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 CC2D2AQ9P2K1 1620 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 PZPP20742 1482 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 C1orf167Q5SNV9 1468 aa-0.29□□□□□ -2.46
COPS3-206ENST00000471414 A0A0G2JMZ2 1700 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 XRN1Q8IZH2 1706 aaKnown RBP-0.3□□□□□ -2.46
COPS3-206ENST00000471414 GOLGA4Q13439 2230 aaKnown RBP-0.3□□□□□ -2.46
COPS3-206ENST00000471414 PIEZO2Q9H5I5 2752 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 FAM223BA6NKX1 122 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 H3BQ15 152 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 SFTA2Q6UW10 78 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 BSNQ9UPA5 3926 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 TOPAZ1Q8N9V7 1692 aa-0.3□□□□□ -2.46
COPS3-206ENST00000471414 SETBP1Q9Y6X0 1596 aa-0.31□□□□□ -2.46
COPS3-206ENST00000471414 A0A1B0GWA3 101 aa-0.31□□□□□ -2.46
COPS3-206ENST00000471414 SPINK4O60575 86 aa-0.31□□□□□ -2.46
COPS3-206ENST00000471414 MRPS10P82664 201 aaKnown RBP-0.31□□□□□ -2.46
COPS3-206ENST00000471414 C12orf57Q99622 126 aa-0.31□□□□□ -2.46
COPS3-206ENST00000471414 ABCA3Q99758 1704 aa-0.31□□□□□ -2.46
COPS3-206ENST00000471414 ZFHX3Q15911 3703 aa-0.31□□□□□ -2.46
COPS3-206ENST00000471414 PDCD11Q14690 1871 aaKnown RBP-0.31□□□□□ -2.46
COPS3-206ENST00000471414 GVINP1Q7Z2Y8 2422 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 FAM135AQ9P2D6 1515 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 CRYM-AS1A6NIL9 109 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 LINC00587B1AMM8 73 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 LOC730098B7Z3J9 87 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 SAA2P0DJI9 122 aaPredicted RBP-0.32□□□□□ -2.46
COPS3-206ENST00000471414 SPRR2BP35325 72 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 LCN9Q8WX39 176 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 FXYD6Q9H0Q3 95 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 NEBP20929 6669 aa-0.32□□□□□ -2.46
COPS3-206ENST00000471414 ZANQ9Y493 2812 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 SNCAP37840 140 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 KRTDAPP60985 99 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms