RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 MGPP08493 103 aa-1.79□□□□□ -2.7
COMMD3-209ENST00000471350 GUCA1AP43080 201 aaPredicted RBP-1.79□□□□□ -2.7
COMMD3-209ENST00000471350 DYNLRB1Q9NP97 96 aa-1.79□□□□□ -2.7
COMMD3-209ENST00000471350 DNAH11Q96DT5 4516 aa-1.79□□□□□ -2.7
COMMD3-209ENST00000471350 LYSTQ99698 3801 aa-1.79□□□□□ -2.7
COMMD3-209ENST00000471350 TEX15Q9BXT5 2789 aa-1.8□□□□□ -2.7
COMMD3-209ENST00000471350 DMXL1Q9Y485 3027 aa-1.8□□□□□ -2.7
COMMD3-209ENST00000471350 TRBV7-3A0A075B6L6 115 aa-1.8□□□□□ -2.7
COMMD3-209ENST00000471350 SMIM15Q7Z3B0 74 aa-1.8□□□□□ -2.7
COMMD3-209ENST00000471350 KCNRGQ8N5I3 272 aa-1.8□□□□□ -2.7
COMMD3-209ENST00000471350 ANK3Q12955 4377 aaKnown RBP-1.8□□□□□ -2.7
COMMD3-209ENST00000471350 VPS13BQ7Z7G8 4022 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 HMGXB3Q12766 1538 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 MGAM2Q2M2H8 2515 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 MYH13Q9UKX3 1938 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 LOC285095A0A1B0GVY8 99 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 SFT2D2O95562 160 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 FABP1P07148 127 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 FDCSPQ8NFU4 85 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 MGST2Q99735 147 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 FAIMQ9NVQ4 179 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 RAPGEF6Q8TEU7 1601 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 MYH8P13535 1937 aa-1.81□□□□□ -2.7
COMMD3-209ENST00000471350 APOBP04114 4563 aaKnown RBP-1.82□□□□□ -2.7
COMMD3-209ENST00000471350 H1FX-AS1Q4G0G2 97 aa-1.82□□□□□ -2.7
COMMD3-209ENST00000471350 C10orf113Q5VZT2 155 aa-1.82□□□□□ -2.7
COMMD3-209ENST00000471350 ANKRD30AQ9BXX3 1397 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 TSPAN19P0C672 248 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 NEFHP12036 1026 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 UBA52P62987 128 aaKnown RBP-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 GSKIPQ9P0R6 139 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 DNHD1Q96M86 4753 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 CCDC141Q6ZP82 1450 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 MAGI1Q96QZ7 1491 aaPredicted RBP-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 ZZEF1O43149 2961 aa-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 RIMS1Q86UR5 1692 aaKnown RBP-1.83□□□□□ -2.7
COMMD3-209ENST00000471350 USP9XQ93008 2570 aaPredicted RBP-1.84□□□□□ -2.7
COMMD3-209ENST00000471350 HMGN4O00479 90 aa-1.84□□□□□ -2.7
COMMD3-209ENST00000471350 SLIT1O75093 1534 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 PBRM1Q86U86 1689 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 K7ERU9 68 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 M0R2Z0 102 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 LINC00694P0DN24 101 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 WHAMMP3Q1A5X7 153 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 C12orf73Q69YU5 71 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 LINC01600Q96MT4 127 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 SMIM3Q9BZL3 60 aa-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 TROQ12816 1431 aaPredicted RBP-1.85□□□□□ -2.71
COMMD3-209ENST00000471350 AIF1LQ9BQI0 150 aa-1.86□□□□□ -2.71
COMMD3-209ENST00000471350 PRG4Q92954 1404 aaPredicted RBP-1.86□□□□□ -2.71
COMMD3-209ENST00000471350 PTPN23Q9H3S7 1636 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 H3BNG1 76 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 HIST1H1DP16402 221 aaKnown RBP-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 ADAMTS12P58397 1594 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 UBE2D3P61077 147 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 UBE2D2P62837 147 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 MRPL54Q6P161 138 aaKnown RBP-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 FAM167A-AS1Q96KT0 104 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 FMN2Q9NZ56 1722 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 DNAH1Q9P2D7 4330 aa-1.87□□□□□ -2.71
COMMD3-209ENST00000471350 I3L3M4 83 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 COPS9Q8WXC6 57 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 TCEAL4Q96EI5 215 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 PRO1933Q9H354 126 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 CRIPTQ9P021 101 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 PKD1L2Q7Z442 2459 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 KALRNO60229 2985 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 TRANK1O15050 2925 aa-1.88□□□□□ -2.71
COMMD3-209ENST00000471350 PAPPA2Q9BXP8 1791 aa-1.89□□□□□ -2.71
COMMD3-209ENST00000471350 WDR87Q6ZQQ6 2873 aa-1.89□□□□□ -2.71
COMMD3-209ENST00000471350 NBEAP1P0C6P0 100 aa-1.89□□□□□ -2.71
COMMD3-209ENST00000471350 SPRR4Q96PI1 79 aa-1.89□□□□□ -2.71
COMMD3-209ENST00000471350 NXT2Q9NPJ8 142 aaKnown RBP-1.89□□□□□ -2.71
COMMD3-209ENST00000471350 COL4A6Q14031 1691 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 RIF1Q5UIP0 2472 aaKnown RBP-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 LAMA3Q16787 3333 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 ARAP2Q8WZ64 1704 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 IGLC1P0CG04 106 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 BTG2P78543 158 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 SMCO1Q147U7 214 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 UTP20O75691 2785 aaKnown RBP-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 MTORP42345 2549 aa-1.9□□□□□ -2.71
COMMD3-209ENST00000471350 NBEAQ8NFP9 2946 aa-1.91□□□□□ -2.72
COMMD3-209ENST00000471350 GNG14A0A1W2PPG7 69 aa-1.91□□□□□ -2.72
COMMD3-209ENST00000471350 DEFA5Q01523 94 aa-1.91□□□□□ -2.72
COMMD3-209ENST00000471350 TMEM191AQ9H0A3 160 aa-1.91□□□□□ -2.72
COMMD3-209ENST00000471350 CCDC167Q9P0B6 97 aa-1.91□□□□□ -2.72
COMMD3-209ENST00000471350 MYH6P13533 1939 aa-1.91□□□□□ -2.72
COMMD3-209ENST00000471350 CCDC168Q8NDH2 2452 aa-1.92□□□□□ -2.72
COMMD3-209ENST00000471350 CDK5RAP2Q96SN8 1893 aa-1.92□□□□□ -2.72
COMMD3-209ENST00000471350 LRRK2Q5S007 2527 aa-1.92□□□□□ -2.72
COMMD3-209ENST00000471350 NKTRP30414 1462 aaKnown RBP-1.92□□□□□ -2.72
COMMD3-209ENST00000471350 AKAP14Q86UN6 197 aa-1.92□□□□□ -2.72
COMMD3-209ENST00000471350 TSLPQ969D9 159 aa-1.92□□□□□ -2.72
COMMD3-209ENST00000471350 REV3LO60673 3130 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 SACSQ9NZJ4 4579 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 COPZ1P61923 177 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 SEC11AP67812 179 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 PDCD10Q9BUL8 212 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 TPT1P8Q9HAU6 139 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms