RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TRBV27A0A0K0K1C4 114 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 KANTRA0A1W2PQU2 76 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 RAB19A4D1S5 217 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 VCYO14598 125 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 NDUFA1O15239 70 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 FCER1GP30273 86 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 TAGLN2P37802 199 aaKnown RBP5.3□□□□□ -1.56
XRN1-208ENST00000470537 SPAG11BQ08648 103 aa5.3□□□□□ -1.56
XRN1-208ENST00000470537 OPRPNQ99935 248 aaPredicted RBP5.3□□□□□ -1.56
XRN1-208ENST00000470537 TRAV13-1A0A0B4J241 112 aa5.29□□□□□ -1.56
XRN1-208ENST00000470537 A8MWL6 223 aa5.29□□□□□ -1.56
XRN1-208ENST00000470537 TSHBP01222 138 aa5.29□□□□□ -1.56
XRN1-208ENST00000470537 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
XRN1-208ENST00000470537 KIR2DL4Q99706 377 aa5.29□□□□□ -1.56
XRN1-208ENST00000470537 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
XRN1-208ENST00000470537 C5orf38Q86SI9 138 aa5.28□□□□□ -1.56
XRN1-208ENST00000470537 TMEM242Q9NWH2 141 aa5.28□□□□□ -1.56
XRN1-208ENST00000470537 HMSDA8MTL9 139 aa5.27□□□□□ -1.57
XRN1-208ENST00000470537 TCAPO15273 167 aa5.27□□□□□ -1.57
XRN1-208ENST00000470537 ZNF861PO60384 105 aa5.27□□□□□ -1.57
XRN1-208ENST00000470537 TSPAN13O95857 204 aa5.27□□□□□ -1.57
XRN1-208ENST00000470537 POLR2KP53803 58 aaKnown RBP5.27□□□□□ -1.57
XRN1-208ENST00000470537 FAM19A5Q7Z5A7 132 aaPredicted RBP5.27□□□□□ -1.57
XRN1-208ENST00000470537 TRBV20OR9-2A0A075B6H5 130 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 M0QXV9 152 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 PPP1R2P9O14990 202 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 FOXA3P55318 350 aaPredicted RBP5.26□□□□□ -1.57
XRN1-208ENST00000470537 GAGE2EQ4V326 116 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 ORAOV1Q8WV07 137 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 TIMM21Q9BVV7 248 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 RNASE7Q9H1E1 156 aaKnown RBP5.26□□□□□ -1.57
XRN1-208ENST00000470537 GAGE2DQ9UEU5 116 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 UBE2D4Q9Y2X8 147 aa5.26□□□□□ -1.57
XRN1-208ENST00000470537 GATCO43716 136 aaKnown RBP5.25□□□□□ -1.57
XRN1-208ENST00000470537 NUPR1O60356 82 aa5.25□□□□□ -1.57
XRN1-208ENST00000470537 CRYGAP11844 174 aa5.25□□□□□ -1.57
XRN1-208ENST00000470537 OCC1Q8TAD7 63 aa5.25□□□□□ -1.57
XRN1-208ENST00000470537 SMDT1Q9H4I9 107 aa5.25□□□□□ -1.57
XRN1-208ENST00000470537 TRBV30A0A0K0K1B3 111 aa5.24□□□□□ -1.57
XRN1-208ENST00000470537 A0A1B0GUT8 65 aa5.24□□□□□ -1.57
XRN1-208ENST00000470537 FAM168BA1KXE4 195 aa5.24□□□□□ -1.57
XRN1-208ENST00000470537 SUMO2P61956 95 aaKnown RBP5.24□□□□□ -1.57
XRN1-208ENST00000470537 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
XRN1-208ENST00000470537 FAM231DQ6ZW35 169 aa5.24□□□□□ -1.57
XRN1-208ENST00000470537 TYMSOSQ8TAI1 123 aa5.24□□□□□ -1.57
XRN1-208ENST00000470537 PACRGQ96M98 296 aaPredicted RBP5.24□□□□□ -1.57
XRN1-208ENST00000470537 TGIF2-C20orf24A0A0A6YYL0 155 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 IGHV3OR16-9A0A0B4J2B5 98 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 NDUFC2-KCTD14E9PQ53 114 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 RAB4AP20338 218 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 RPL28P46779 137 aaKnown RBP5.23□□□□□ -1.57
XRN1-208ENST00000470537 CTAG1AP78358 180 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 BLOC1S1P78537 153 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
XRN1-208ENST00000470537 RIGQ13278 110 aa5.22□□□□□ -1.57
XRN1-208ENST00000470537 RNASE13Q5GAN3 156 aaKnown RBP5.22□□□□□ -1.57
XRN1-208ENST00000470537 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
XRN1-208ENST00000470537 SPANXA1Q9NS26 97 aa5.22□□□□□ -1.57
XRN1-208ENST00000470537 C6orf48Q9UBA6 75 aa5.22□□□□□ -1.57
XRN1-208ENST00000470537 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
XRN1-208ENST00000470537 LINC00862A6NCI5 91 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 PRSS47A8MTI9 375 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 HIGD1CA8MV81 97 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 K7EN84 100 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 HBBP68871 147 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 Q6ZUT4 128 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 C20orf78Q9BR46 151 aa5.21□□□□□ -1.58
XRN1-208ENST00000470537 IFITM10A6NMD0 228 aa5.2□□□□□ -1.58
XRN1-208ENST00000470537 TMEM250H0YL14 139 aa5.2□□□□□ -1.58
XRN1-208ENST00000470537 SMLR1H3BR10 107 aa5.2□□□□□ -1.58
XRN1-208ENST00000470537 MRPS36P82909 103 aaKnown RBP5.2□□□□□ -1.58
XRN1-208ENST00000470537 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
XRN1-208ENST00000470537 C10orf25Q5T742 122 aa5.2□□□□□ -1.58
XRN1-208ENST00000470537 AMN1Q8IY45 258 aa5.2□□□□□ -1.58
XRN1-208ENST00000470537 PRSS2P07478 247 aa5.19□□□□□ -1.58
XRN1-208ENST00000470537 CKS1BP61024 79 aa5.19□□□□□ -1.58
XRN1-208ENST00000470537 RGS21Q2M5E4 152 aa5.19□□□□□ -1.58
XRN1-208ENST00000470537 CTDSP1Q9GZU7 261 aa5.19□□□□□ -1.58
XRN1-208ENST00000470537 IGLV7-46A0A075B6I9 117 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 TRBV24-1A0A075B6N3 115 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 ZNF727A8MUV8 499 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
XRN1-208ENST00000470537 LINC01547P58512 204 aaPredicted RBP5.18□□□□□ -1.58
XRN1-208ENST00000470537 RPL32P62910 135 aaKnown RBP5.18□□□□□ -1.58
XRN1-208ENST00000470537 LINC01561Q8N1V8 128 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 NRACQ8N912 160 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 BATF3Q9NR55 127 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 C22orf24Q9Y442 160 aa5.18□□□□□ -1.58
XRN1-208ENST00000470537 A0A087X002 238 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 BCE1O60756 84 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 RAB5AP20339 215 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 CKS2P33552 79 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 KIAA0087Q14695 138 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 C6orf226Q5I0X4 101 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 C9orf129Q5T035 196 aaKnown RBP5.17□□□□□ -1.58
XRN1-208ENST00000470537 LINC00173Q6ZV60 143 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms