RNA–Protein interactions for RNA: ENST00000470434.1

SBF1-205, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-205	ENST00000470434	CUBN	O60494	3623 aa		13.57	□□□□□ -0.24
SBF1-205	ENST00000470434	TRBV10-1	A0A0K0K1A3	114 aa		13.57	□□□□□ -0.24
SBF1-205	ENST00000470434	SMIM1	B2RUZ4	78 aa		13.57	□□□□□ -0.24
SBF1-205	ENST00000470434	HIST2H2BD	Q6DRA6	164 aa		13.57	□□□□□ -0.24
SBF1-205	ENST00000470434	STH	Q8IWL8	128 aa		13.57	□□□□□ -0.24
SBF1-205	ENST00000470434	RPL36A	P83881	106 aa	Known RBP	13.56	□□□□□ -0.24
SBF1-205	ENST00000470434	DEFB121	Q5J5C9	76 aa		13.56	□□□□□ -0.24
SBF1-205	ENST00000470434	RPL36AL	Q969Q0	106 aa	Known RBP	13.56	□□□□□ -0.24
SBF1-205	ENST00000470434	TRAV25	A0A0B4J276	109 aa		13.55	□□□□□ -0.24
SBF1-205	ENST00000470434		K7EQD1	137 aa		13.55	□□□□□ -0.24
SBF1-205	ENST00000470434		Q6Q795	121 aa		13.55	□□□□□ -0.24
SBF1-205	ENST00000470434	NTM-AS1	Q6ZSK4	140 aa		13.55	□□□□□ -0.24
SBF1-205	ENST00000470434	DAZ2	Q13117	558 aa	Known RBP	13.55	□□□□□ -0.24
SBF1-205	ENST00000470434	DAZ4	Q86SG3	579 aa	Known RBP	13.55	□□□□□ -0.24
SBF1-205	ENST00000470434	DAZ3	Q9NR90	486 aa	Known RBP	13.55	□□□□□ -0.24
SBF1-205	ENST00000470434	C15orf53	Q8NAA6	179 aa		13.54	□□□□□ -0.24
SBF1-205	ENST00000470434	COPS9	Q8WXC6	57 aa		13.54	□□□□□ -0.24
SBF1-205	ENST00000470434	ZNF625	Q96I27	306 aa	Predicted RBP	13.54	□□□□□ -0.24
SBF1-205	ENST00000470434	WNK1	Q9H4A3	2382 aa		13.54	□□□□□ -0.24
SBF1-205	ENST00000470434	FAM240A	A0A1B0GVK7	77 aa		13.54	□□□□□ -0.24
SBF1-205	ENST00000470434	LINC01006	Q8NI28	216 aa		13.54	□□□□□ -0.24
SBF1-205	ENST00000470434	NHLRC4	P0CG21	123 aa	Predicted RBP	13.53	□□□□□ -0.24
SBF1-205	ENST00000470434	NIPBL	Q6KC79	2804 aa	eCLIP	13.53	□□□□□ -0.24
SBF1-205	ENST00000470434	TRAV13-1	A0A0B4J241	112 aa		13.52	□□□□□ -0.24
SBF1-205	ENST00000470434	SOSTDC1	Q6X4U4	206 aa		13.52	□□□□□ -0.24
SBF1-205	ENST00000470434		Q6ZTI0	123 aa		13.52	□□□□□ -0.24
SBF1-205	ENST00000470434	NDUFV3	P56181	108 aa	Known RBP	13.52	□□□□□ -0.25
SBF1-205	ENST00000470434	MRPL23	Q16540	153 aa	Known RBP	13.52	□□□□□ -0.25
SBF1-205	ENST00000470434	CDC42SE2	Q9NRR3	84 aa		13.52	□□□□□ -0.25
SBF1-205	ENST00000470434		A0A0U1RRA0	63 aa		13.51	□□□□□ -0.25
SBF1-205	ENST00000470434		F5H768	121 aa		13.51	□□□□□ -0.25
SBF1-205	ENST00000470434	COX7A2L	O14548	114 aa		13.51	□□□□□ -0.25
SBF1-205	ENST00000470434	SHISA2	Q6UWI4	295 aa		13.51	□□□□□ -0.25
SBF1-205	ENST00000470434	PRIMA1	Q86XR5	153 aa		13.51	□□□□□ -0.25
SBF1-205	ENST00000470434	JMJD1C	Q15652	2540 aa		13.5	□□□□□ -0.25
SBF1-205	ENST00000470434	C2CD3	Q4AC94	2353 aa		13.5	□□□□□ -0.25
SBF1-205	ENST00000470434	MEIG1	Q5JSS6	88 aa		13.49	□□□□□ -0.25
SBF1-205	ENST00000470434	GAGE12J	A6NER3	117 aa		13.49	□□□□□ -0.25
SBF1-205	ENST00000470434	HERV-K104	P63124	156 aa		13.49	□□□□□ -0.25
SBF1-205	ENST00000470434	GAGE4	Q13068	117 aa		13.49	□□□□□ -0.25
SBF1-205	ENST00000470434	GAGE5	Q13069	117 aa		13.49	□□□□□ -0.25
SBF1-205	ENST00000470434	TTC32	Q5I0X7	151 aa		13.49	□□□□□ -0.25
SBF1-205	ENST00000470434	NF1	P21359	2839 aa		13.48	□□□□□ -0.25
SBF1-205	ENST00000470434	PPDPF	Q9H3Y8	114 aa		13.48	□□□□□ -0.25
SBF1-205	ENST00000470434	GAGE6	Q13070	117 aa		13.46	□□□□□ -0.25
SBF1-205	ENST00000470434	CCL24	O00175	119 aa		13.45	□□□□□ -0.26
SBF1-205	ENST00000470434	TMEM243	Q9BU79	118 aa		13.45	□□□□□ -0.26
SBF1-205	ENST00000470434	NOP10	Q9NPE3	64 aa	Known RBP	13.45	□□□□□ -0.26
SBF1-205	ENST00000470434		A0A1W2PRX2	142 aa		13.45	□□□□□ -0.26
SBF1-205	ENST00000470434	UBE2L6	O14933	153 aa		13.45	□□□□□ -0.26
SBF1-205	ENST00000470434	KRTAP24-1	Q3LI83	254 aa		13.45	□□□□□ -0.26
SBF1-205	ENST00000470434	C11orf44	Q8N8P7	122 aa		13.43	□□□□□ -0.26
SBF1-205	ENST00000470434	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.43	□□□□□ -0.26
SBF1-205	ENST00000470434	TRAC	P01848	142 aa		13.43	□□□□□ -0.26
SBF1-205	ENST00000470434	NOTCH3	Q9UM47	2321 aa		13.42	□□□□□ -0.26
SBF1-205	ENST00000470434	PLAC8L1	A1L4L8	177 aa		13.42	□□□□□ -0.26
SBF1-205	ENST00000470434	GIG44	P09565	113 aa	Predicted RBP	13.42	□□□□□ -0.26
SBF1-205	ENST00000470434	ACYP1	P07311	99 aa		13.4	□□□□□ -0.26
SBF1-205	ENST00000470434	C16orf74	Q96GX8	76 aa		13.4	□□□□□ -0.26
SBF1-205	ENST00000470434	TRBV7-7	A0A0K0K1E9	115 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	LOC100131303	A0A0U1RQF7	123 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	TRBV6-4	A0A1B0GX49	114 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434		B5MCH6	92 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	GAGE7	O76087	117 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	PF4	P02776	101 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	GAGE12F	P0CL80	117 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	GAGE12G	P0CL81	117 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	GAGE12I	P0CL82	117 aa		13.39	□□□□□ -0.27
SBF1-205	ENST00000470434	TRGV2	A0A075B6R0	118 aa		13.38	□□□□□ -0.27
SBF1-205	ENST00000470434	CMC4	P56277	68 aa	Predicted RBP	13.38	□□□□□ -0.27
SBF1-205	ENST00000470434	COX7B2	Q8TF08	81 aa		13.38	□□□□□ -0.27
SBF1-205	ENST00000470434	FAM222A	Q5U5X8	452 aa		13.37	□□□□□ -0.27
SBF1-205	ENST00000470434	FAM218A	Q96MZ4	157 aa		13.37	□□□□□ -0.27
SBF1-205	ENST00000470434	TRAV13-2	A0A0B4J235	113 aa		13.37	□□□□□ -0.27
SBF1-205	ENST00000470434	CCDC179	H3BU77	68 aa		13.36	□□□□□ -0.27
SBF1-205	ENST00000470434	BAALC-AS2	P0C853	105 aa		13.36	□□□□□ -0.27
SBF1-205	ENST00000470434	RPL28	P46779	137 aa	Known RBP	13.36	□□□□□ -0.27
SBF1-205	ENST00000470434	ATR	Q13535	2644 aa		13.36	□□□□□ -0.27
SBF1-205	ENST00000470434	OVOL2	Q9BRP0	275 aa		13.36	□□□□□ -0.27
SBF1-205	ENST00000470434	KRTAP10-3	P60369	221 aa		13.35	□□□□□ -0.27
SBF1-205	ENST00000470434	MIR7-3HG	Q8N6C7	128 aa		13.35	□□□□□ -0.27
SBF1-205	ENST00000470434	SS18L2	Q9UHA2	77 aa		13.35	□□□□□ -0.27
SBF1-205	ENST00000470434	C22orf24	Q9Y442	160 aa		13.35	□□□□□ -0.27
SBF1-205	ENST00000470434	CRP	P02741	224 aa		13.34	□□□□□ -0.27
SBF1-205	ENST00000470434	WFDC10A	Q9H1F0	79 aa		13.34	□□□□□ -0.27
SBF1-205	ENST00000470434	FAM110A	Q9BQ89	295 aa		13.34	□□□□□ -0.27
SBF1-205	ENST00000470434	TRGV4	A0A0C4DH28	118 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	LINC00337	Q8N6G1	96 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	CSNK1G2-AS1	Q8NCQ2	148 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	IGKV2-28	A0A075B6P5	120 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	IGKV2D-28	P01615	120 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	RPL35A	P18077	110 aa	Known RBP	13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	SND1-IT1	Q9HBX3	110 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	C19orf73	Q9NVV2	129 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	TOMM7	Q9P0U1	55 aa		13.33	□□□□□ -0.28
SBF1-205	ENST00000470434	IGLV4-60	A0A075B6I1	120 aa		13.32	□□□□□ -0.28
SBF1-205	ENST00000470434	TRBV6-8	A0A0A6YYG3	113 aa		13.31	□□□□□ -0.28
SBF1-205	ENST00000470434	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.31	□□□□□ -0.28
SBF1-205	ENST00000470434	IMUP	Q9GZP8	106 aa		13.31	□□□□□ -0.28
SBF1-205	ENST00000470434	SMCR5	Q8TEV8	140 aa		13.31	□□□□□ -0.28

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