RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
SFXN3-205ENST00000470252 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
SFXN3-205ENST00000470252 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
SFXN3-205ENST00000470252 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
SFXN3-205ENST00000470252 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
SFXN3-205ENST00000470252 FAM236AA0A1B0GUQ0 79 aa9.37□□□□□ -0.91
SFXN3-205ENST00000470252 FAM236BA0A1B0GV22 79 aa9.37□□□□□ -0.91
SFXN3-205ENST00000470252 UBE2L6O14933 153 aa9.36□□□□□ -0.91
SFXN3-205ENST00000470252 Q96MF0 132 aa9.36□□□□□ -0.91
SFXN3-205ENST00000470252 IGHV4-31P0DP07 118 aa9.36□□□□□ -0.91
SFXN3-205ENST00000470252 IMUPQ9GZP8 106 aa9.35□□□□□ -0.91
SFXN3-205ENST00000470252 HIST2H2BCQ6DN03 193 aa9.35□□□□□ -0.91
SFXN3-205ENST00000470252 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
SFXN3-205ENST00000470252 LINC00643Q86TS7 51 aa9.34□□□□□ -0.91
SFXN3-205ENST00000470252 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
SFXN3-205ENST00000470252 Q9HAA7 133 aa9.34□□□□□ -0.91
SFXN3-205ENST00000470252 PTPN13Q12923 2485 aa9.34□□□□□ -0.91
SFXN3-205ENST00000470252 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
SFXN3-205ENST00000470252 CRPP02741 224 aa9.34□□□□□ -0.91
SFXN3-205ENST00000470252 POLQO75417 2590 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 TRAV13-2A0A0B4J235 113 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 C3orf56Q8N813 242 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
SFXN3-205ENST00000470252 HECTD1Q9ULT8 2610 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 MIR7-3HGQ8N6C7 128 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 TOMM7Q9P0U1 55 aa9.33□□□□□ -0.92
SFXN3-205ENST00000470252 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 COX7B2Q8TF08 81 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 MYO9AB2RTY4 2548 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 PF4P02776 101 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 RPL28P46779 137 aaKnown RBP9.32□□□□□ -0.92
SFXN3-205ENST00000470252 GAGE2AQ6NT46 116 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 LINC00337Q8N6G1 96 aa9.32□□□□□ -0.92
SFXN3-205ENST00000470252 C2CD3Q4AC94 2353 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 LOC100131303A0A0U1RQF7 123 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 A0A1W2PRX2 142 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 INAFM2P0DMQ5 153 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 MALP21145 153 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 C11orf44Q8N8P7 122 aa9.31□□□□□ -0.92
SFXN3-205ENST00000470252 IGKV2-28A0A075B6P5 120 aa9.3□□□□□ -0.92
SFXN3-205ENST00000470252 IGKV2D-28P01615 120 aa9.3□□□□□ -0.92
SFXN3-205ENST00000470252 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
SFXN3-205ENST00000470252 TEX15Q9BXT5 2789 aa9.3□□□□□ -0.92
SFXN3-205ENST00000470252 A0A1B0GX51 115 aa9.3□□□□□ -0.92
SFXN3-205ENST00000470252 LINC00158P58513 81 aa9.3□□□□□ -0.92
SFXN3-205ENST00000470252 FLNBO75369 2602 aaKnown RBP9.29□□□□□ -0.92
SFXN3-205ENST00000470252 FBN2P35556 2912 aa9.29□□□□□ -0.92
SFXN3-205ENST00000470252 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
SFXN3-205ENST00000470252 NBPF19A0A087WUL8 3843 aa9.29□□□□□ -0.92
SFXN3-205ENST00000470252 DNAL4O96015 105 aa9.29□□□□□ -0.92
SFXN3-205ENST00000470252 CENPEQ02224 2701 aa9.29□□□□□ -0.92
SFXN3-205ENST00000470252 J3KT08 172 aa9.28□□□□□ -0.92
SFXN3-205ENST00000470252 SMIM11BQ8TCY0 68 aa9.28□□□□□ -0.92
SFXN3-205ENST00000470252 A0A087WYN8 130 aa9.28□□□□□ -0.92
SFXN3-205ENST00000470252 OVOL2Q9BRP0 275 aa9.27□□□□□ -0.93
SFXN3-205ENST00000470252 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 TRGV4A0A0C4DH28 118 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 CXCL5P42830 114 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 CCL18P55774 89 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 CCL24O00175 119 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 C5orf38Q86SI9 138 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
SFXN3-205ENST00000470252 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
SFXN3-205ENST00000470252 PFN2P35080 140 aa9.25□□□□□ -0.93
SFXN3-205ENST00000470252 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
SFXN3-205ENST00000470252 C9orf129Q5T035 196 aaKnown RBP9.25□□□□□ -0.93
SFXN3-205ENST00000470252 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
SFXN3-205ENST00000470252 SETXQ7Z333 2677 aaKnown RBP9.25□□□□□ -0.93
SFXN3-205ENST00000470252 TRBV6-4A0A1B0GX49 114 aa9.25□□□□□ -0.93
SFXN3-205ENST00000470252 ATP5G1P05496 136 aa9.25□□□□□ -0.93
SFXN3-205ENST00000470252 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
SFXN3-205ENST00000470252 WFDC10AQ9H1F0 79 aa9.25□□□□□ -0.93
SFXN3-205ENST00000470252 C14orf132Q9NPU4 83 aa9.25□□□□□ -0.93
SFXN3-205ENST00000470252 RPL35AP18077 110 aaKnown RBP9.24□□□□□ -0.93
SFXN3-205ENST00000470252 KRTAP10-9P60411 292 aa9.24□□□□□ -0.93
SFXN3-205ENST00000470252 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
SFXN3-205ENST00000470252 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
SFXN3-205ENST00000470252 UQCRQO14949 82 aa9.24□□□□□ -0.93
SFXN3-205ENST00000470252 OR13C6PQ8NH95 151 aa9.24□□□□□ -0.93
SFXN3-205ENST00000470252 H0YGX0 51 aa9.23□□□□□ -0.93
SFXN3-205ENST00000470252 CUBNO60494 3623 aa9.23□□□□□ -0.93
SFXN3-205ENST00000470252 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
SFXN3-205ENST00000470252 LECT2O14960 151 aa9.23□□□□□ -0.93
SFXN3-205ENST00000470252 PAX4O43316 350 aa9.23□□□□□ -0.93
SFXN3-205ENST00000470252 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
SFXN3-205ENST00000470252 LINC00526Q96FQ7 95 aa9.22□□□□□ -0.93
SFXN3-205ENST00000470252 C11orf68Q9H3H3 251 aaKnown RBP9.22□□□□□ -0.93
SFXN3-205ENST00000470252 TLN2Q9Y4G6 2542 aa9.21□□□□□ -0.93
SFXN3-205ENST00000470252 A0A087WZ39 114 aa9.21□□□□□ -0.94
SFXN3-205ENST00000470252 DEFB113Q30KQ7 82 aa9.21□□□□□ -0.94
SFXN3-205ENST00000470252 JMJD1CQ15652 2540 aa9.2□□□□□ -0.94
SFXN3-205ENST00000470252 AKAP9Q99996 3911 aa9.2□□□□□ -0.94
SFXN3-205ENST00000470252 DNAJC9-AS1A6NH13 148 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms