RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SLC48A1Q6P1K1 146 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 SMIM5Q71RC9 77 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 CYP4F30PQ9H0H9 118 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 ANKRD36A6QL64 1941 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 CLTCL1P53675 1640 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 MYO3AQ8NEV4 1616 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 ALS2Q96Q42 1657 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 MON2Q7Z3U7 1717 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 MUC22E2RYF6 1773 aaPredicted RBP1.06□□□□□ -2.24
BRCA2-202ENST00000470094 CACNA1BQ00975 2339 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 UNC13BO14795 1591 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 PIGBOS1A0A0B4J2F0 54 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 FAUP35544 74 aaKnown RBP1.05□□□□□ -2.24
BRCA2-202ENST00000470094 UBE2G1P62253 170 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 SPANXN1Q5VSR9 72 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 ZGRF1Q86YA3 2104 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 SPTSSAQ969W0 71 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 TMEM141Q96I45 108 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 FAM167A-AS1Q96KT0 104 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 MANBALQ9NQG1 85 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 MRPL36Q9P0J6 103 aaKnown RBP1.05□□□□□ -2.24
BRCA2-202ENST00000470094 TJP1Q07157 1748 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 UBR1Q8IWV7 1749 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 NWD2Q9ULI1 1742 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 ANKRD36CQ5JPF3 1778 aa1.05□□□□□ -2.24
BRCA2-202ENST00000470094 AFDNP55196 1824 aaKnown RBP1.05□□□□□ -2.24
BRCA2-202ENST00000470094 ERCC6L2Q5T890 1561 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 TET1Q8NFU7 2136 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 KDM6BO15054 1643 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 USP32Q8NFA0 1604 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 ADCY10Q96PN6 1610 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 CC2D2AQ9P2K1 1620 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 MED12Q93074 2177 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 ARFGEF1Q9Y6D6 1849 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 TRBV10-3A0A0K0K1G6 114 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 PIPP12273 146 aaPredicted RBP1.04□□□□□ -2.24
BRCA2-202ENST00000470094 SMIM11AP58511 58 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 RPL37AP61513 92 aaKnown RBP1.04□□□□□ -2.24
BRCA2-202ENST00000470094 VMO1Q7Z5L0 202 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 DEFB107AQ8IZN7 70 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 FAM213BQ8TBF2 198 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 NMES1Q9C002 83 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 WFDC10AQ9H1F0 79 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 NXT2Q9NPJ8 142 aaKnown RBP1.04□□□□□ -2.24
BRCA2-202ENST00000470094 LINC00474Q9P2X8 69 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 MYO7BQ6PIF6 2116 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 TECTAO75443 2155 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 ARHGEF5Q12774 1597 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 NESP48681 1621 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 RREB1Q92766 1687 aa1.04□□□□□ -2.24
BRCA2-202ENST00000470094 NUP188Q5SRE5 1749 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 TNS1Q9HBL0 1735 aaKnown RBP1.03□□□□□ -2.24
BRCA2-202ENST00000470094 TRBV7-1A0A0A6YYK4 115 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 MYMXA0A1B0GTQ4 84 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 LOC101927531A0A1B0GV80 90 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 LOC285095A0A1B0GVY8 99 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 HIGD1CA8MV81 97 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 FXYD1O00168 92 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 SSBP1Q04837 148 aaKnown RBP1.03□□□□□ -2.24
BRCA2-202ENST00000470094 IFI27L1Q96BM0 104 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 DYNLRB1Q9NP97 96 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 NDUFA12Q9UI09 145 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 EHBP1L1Q8N3D4 1523 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 CLTCQ00610 1675 aaKnown RBP1.03□□□□□ -2.24
BRCA2-202ENST00000470094 PREX1Q8TCU6 1659 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 CRYBG1Q9Y4K1 1723 aa1.03□□□□□ -2.24
BRCA2-202ENST00000470094 DLG5Q8TDM6 1919 aa1.03□□□□□ -2.25
BRCA2-202ENST00000470094 TRBV25-1A0A075B6N4 114 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 TRAV23DV6A0A075B6W5 121 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 A0A0G2JND7 137 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 NBDYA0A0U1RRE5 68 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 LOC285556D6RIA3 1793 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 TRPM2O94759 1503 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 C3P01024 1663 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 HMGA1P17096 107 aaKnown RBP1.02□□□□□ -2.25
BRCA2-202ENST00000470094 MRC1P22897 1456 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 PI4KAP42356 2102 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 UBE2D1P51668 147 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 C9orf116Q5BN46 136 aaPredicted RBP1.02□□□□□ -2.25
BRCA2-202ENST00000470094 NEXMIFQ5QGS0 1516 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 CYP2G1PQ6ZSU1 146 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 TOMM5Q8N4H5 51 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 CICQ96RK0 1608 aaPredicted RBP1.02□□□□□ -2.25
BRCA2-202ENST00000470094 FMN2Q9NZ56 1722 aa1.02□□□□□ -2.25
BRCA2-202ENST00000470094 EIF2AK4Q9P2K8 1649 aaKnown RBP1.02□□□□□ -2.25
BRCA2-202ENST00000470094 COL14A1Q05707 1796 aaKnown RBP1.01□□□□□ -2.25
BRCA2-202ENST00000470094 NHSQ6T4R5 1651 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 FXYD6-FXYD2A0A087WZ82 144 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 TRAV22A0A0B4J277 110 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 TEX49A0A1B0GTD5 131 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 TMEM14DPA8MWL7 114 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 HCG22E2RYF7 251 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 HMGN2P05204 90 aaKnown RBP1.01□□□□□ -2.25
BRCA2-202ENST00000470094 GCHFRP30047 84 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 Q5VV11 94 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 Q6JHZ5 121 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 Q86TA4 180 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 SMIM4Q8WVI0 70 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 BPESC1Q9GZL8 116 aa1.01□□□□□ -2.25
BRCA2-202ENST00000470094 FXYD6Q9H0Q3 95 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms