RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
LINC00173-201ENST00000470091 TMEM262E9PQX1 116 aa9.2□□□□□ -0.94
LINC00173-201ENST00000470091 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
LINC00173-201ENST00000470091 Q8N3U1 123 aa9.2□□□□□ -0.94
LINC00173-201ENST00000470091 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
LINC00173-201ENST00000470091 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 PLNP26678 52 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 RBX1P62877 108 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 SPATA45Q537H7 98 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 C2orf88Q9BSF0 95 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
LINC00173-201ENST00000470091 A0A0J9YXV3 536 aa9.18□□□□□ -0.94
LINC00173-201ENST00000470091 SIVA1O15304 175 aa9.18□□□□□ -0.94
LINC00173-201ENST00000470091 PRO1933Q9H354 126 aa9.18□□□□□ -0.94
LINC00173-201ENST00000470091 HSBP1L1C9JCN9 74 aa9.17□□□□□ -0.94
LINC00173-201ENST00000470091 IGLC3P0DOY3 106 aa9.17□□□□□ -0.94
LINC00173-201ENST00000470091 UBE2D1P51668 147 aa9.17□□□□□ -0.94
LINC00173-201ENST00000470091 STPG4Q8N801 248 aa9.17□□□□□ -0.94
LINC00173-201ENST00000470091 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
LINC00173-201ENST00000470091 HERC1Q15751 4861 aa9.17□□□□□ -0.94
LINC00173-201ENST00000470091 TRAV13-1A0A0B4J241 112 aa9.16□□□□□ -0.94
LINC00173-201ENST00000470091 TRAV8-6A0A0B4J262 113 aa9.16□□□□□ -0.94
LINC00173-201ENST00000470091 PKIAP61925 76 aa9.16□□□□□ -0.94
LINC00173-201ENST00000470091 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
LINC00173-201ENST00000470091 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
LINC00173-201ENST00000470091 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
LINC00173-201ENST00000470091 IGKV3OR2-268A0A0C4DH90 116 aa9.15□□□□□ -0.94
LINC00173-201ENST00000470091 A0A1B0GUV1 79 aa9.15□□□□□ -0.94
LINC00173-201ENST00000470091 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
LINC00173-201ENST00000470091 FAT1Q14517 4588 aa9.15□□□□□ -0.95
LINC00173-201ENST00000470091 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
LINC00173-201ENST00000470091 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
LINC00173-201ENST00000470091 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 EREGO14944 169 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 IGHV3-30P01768 117 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 IGHV3-33P01772 117 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 IGHV3-30-3P0DP02 117 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 IGHV3-30-5P0DP03 117 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 TMEM170BQ5T4T1 132 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
LINC00173-201ENST00000470091 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
LINC00173-201ENST00000470091 LINC00242Q5T6M2 205 aa9.12□□□□□ -0.95
LINC00173-201ENST00000470091 LINC00269Q8N2A0 174 aa9.12□□□□□ -0.95
LINC00173-201ENST00000470091 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
LINC00173-201ENST00000470091 IGKV2D-26A0A0A0MRZ7 120 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 TSTD3H0UI37 97 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 COX6A2Q02221 97 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 FAM19A3Q7Z5A8 133 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 LINC00469Q8N7U9 141 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
LINC00173-201ENST00000470091 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
LINC00173-201ENST00000470091 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
LINC00173-201ENST00000470091 PCP4L1A6NKN8 68 aa9.1□□□□□ -0.95
LINC00173-201ENST00000470091 NMUP48645 174 aa9.1□□□□□ -0.95
LINC00173-201ENST00000470091 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
LINC00173-201ENST00000470091 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
LINC00173-201ENST00000470091 IGLV5-45A0A087WSX0 123 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 TMEM223A0PJW6 202 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 HERVK_113P61574 105 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 HERVK_113P63121 156 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 SEC11AP67812 179 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 REG3AQ06141 175 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 CDKN2A-AS1Q9UH64 79 aa9.09□□□□□ -0.95
LINC00173-201ENST00000470091 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 A0A087WTM6 91 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 E9PLD3 99 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 SPINK8P0C7L1 97 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 XGP55808 180 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 KRTAP10-1P60331 282 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 LINC01556Q5JQF7 62 aa9.08□□□□□ -0.96
LINC00173-201ENST00000470091 DMBT1Q9UGM3 2413 aaPredicted RBP9.07□□□□□ -0.96
LINC00173-201ENST00000470091 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 CCL25O15444 150 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 XCL1P47992 114 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 SS18Q15532 418 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 PCP2Q8IVA1 136 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
LINC00173-201ENST00000470091 IGLV10-54A0A075B6I4 117 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 H3BRM9 83 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 CRPP02741 224 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 COX8AP10176 69 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 PRR34Q9NV39 138 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 UQCR10Q9UDW1 63 aa9.06□□□□□ -0.96
LINC00173-201ENST00000470091 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
LINC00173-201ENST00000470091 LEPROTO15243 131 aa9.05□□□□□ -0.96
LINC00173-201ENST00000470091 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
LINC00173-201ENST00000470091 SLC25A34Q6PIV7 304 aa9.05□□□□□ -0.96
LINC00173-201ENST00000470091 ENHOQ6UWT2 76 aa9.05□□□□□ -0.96
LINC00173-201ENST00000470091 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
LINC00173-201ENST00000470091 MIEN1Q9BRT3 115 aa9.05□□□□□ -0.96
LINC00173-201ENST00000470091 SMIM1B2RUZ4 78 aa9.04□□□□□ -0.96
LINC00173-201ENST00000470091 MYCBP2O75592 4640 aa9.04□□□□□ -0.96
LINC00173-201ENST00000470091 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
LINC00173-201ENST00000470091 IGHV1-58A0A0C4DH39 117 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms