RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 IGHV3-38A0A0C4DH36 116 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 CCKP06307 115 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 UBE2D3P61077 147 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 SHANK1Q9Y566 2161 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 K7ERJ3 54 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 NDUFS5O43920 106 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 UBE2D1P51668 147 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 CXCL6P80162 114 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 WFDC2Q14508 124 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 FLNAP21333 2647 aaKnown RBP4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 hDV103S1A0JD37 113 aa4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 HIGD2AQ9BW72 106 aa4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 MALRD1Q5VYJ5 2156 aa4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 IGLV2-11P01706 119 aa4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 LINC00526Q96FQ7 95 aa4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 MUC22E2RYF6 1773 aaPredicted RBP4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 KIF26AQ9ULI4 1882 aaPredicted RBP4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
CCDC144A-212ENST00000470068 C16orf90A8MZG2 172 aa4.53□□□□□ -1.69
CCDC144A-212ENST00000470068 TSHBP01222 138 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 Q8N2B8 174 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 AMELXQ99217 191 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 A0A0C4DFX4 3053 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 PRAC2D3DTV9 90 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 CASC2Q6XLA1 102 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 IGIPA6NJ69 53 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 BRWD1-AS2P59051 145 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 POM121L12Q8N7R1 296 aa4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 DMBT1Q9UGM3 2413 aaPredicted RBP4.52□□□□□ -1.69
CCDC144A-212ENST00000470068 CRIP3Q6Q6R5 217 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 C1orf195Q5TG92 126 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 FAM30AQ9NZY2 134 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 CRYGDP07320 174 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 Q8N9L7 120 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
CCDC144A-212ENST00000470068 MRPS12O15235 138 aaKnown RBP4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 C20orf197Q8N268 126 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 KLK12Q9UKR0 248 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 NUPR1O60356 82 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 LIMD2Q9BT23 127 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 TRBV7-7A0A0K0K1E9 115 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 LINC00959A0A1B0GUT2 108 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 DEFB136Q30KP8 78 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 ZNF702PQ9H963 129 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 SELENOKQ9Y6D0 94 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 Q6ZQT7 251 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
CCDC144A-212ENST00000470068 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 TRIAP1O43715 76 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 ERC2-IT1O76042 136 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 DEFB131BA0A096LNP1 70 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 REV3LO60673 3130 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 DCANP1Q8TF63 244 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 RNASE3P12724 160 aaKnown RBP4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 DEFB135Q30KP9 77 aa4.49□□□□□ -1.69
CCDC144A-212ENST00000470068 TEX49A0A1B0GTD5 131 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 UNQ9165/PRO28630Q6UXU0 137 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 Q6ZSV7 163 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 IGSF10Q6WRI0 2623 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 CDSNQ15517 529 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 NTM-AS1Q6ZSK4 140 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 HEATR5AQ86XA9 2040 aa4.48□□□□□ -1.69
CCDC144A-212ENST00000470068 EML6Q6ZMW3 1958 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 IGKV3D-7A0A0C4DH55 119 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 RPL37AP61513 92 aaKnown RBP4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 GDF5OSQ5U4N7 250 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 C2orf91Q6ZV80 131 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 C14orf132Q9NPU4 83 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 H0Y9J4 135 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 NCR3O14931 201 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 FHL3Q13643 280 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 C1orf134Q5TEV5 83 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 PLXND1Q9Y4D7 1925 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 RITA1Q96K30 269 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 LINC00269Q8N2A0 174 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
CCDC144A-212ENST00000470068 HCG22E2RYF7 251 aa4.46□□□□□ -1.69
CCDC144A-212ENST00000470068 CRIP1P50238 77 aa4.46□□□□□ -1.69
CCDC144A-212ENST00000470068 ESM1Q9NQ30 184 aa4.46□□□□□ -1.69
CCDC144A-212ENST00000470068 CENPEQ02224 2701 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 CLEC2BQ92478 149 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 Q9HAA7 133 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 Q6ZTI0 123 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 IGLV5-45A0A087WSX0 123 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 DEFB105AQ8NG35 78 aa4.46□□□□□ -1.7
CCDC144A-212ENST00000470068 Q8N814 137 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 IGKV4-1P06312 121 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 C6orf99Q4VX62 202 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 XAGE1AQ9HD64 81 aa4.45□□□□□ -1.7
CCDC144A-212ENST00000470068 C2orf16Q68DN1 1984 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms