RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 RNASE1P07998 156 aaKnown RBP11.16□□□□□ -0.62
KCNC4-206ENST00000469655 TRBV27A0A0K0K1C4 114 aa11.15□□□□□ -0.62
KCNC4-206ENST00000469655 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
KCNC4-206ENST00000469655 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.62
KCNC4-206ENST00000469655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.63
KCNC4-206ENST00000469655 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.63
KCNC4-206ENST00000469655 VSIG2Q96IQ7 327 aa11.15□□□□□ -0.63
KCNC4-206ENST00000469655 SPANXCQ9NY87 97 aa11.15□□□□□ -0.63
KCNC4-206ENST00000469655 MSMBP08118 114 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 KIF25-AS1Q9Y6Z4 181 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 ITPR2Q14571 2701 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 FLNBO75369 2602 aaKnown RBP11.14□□□□□ -0.63
KCNC4-206ENST00000469655 NCR3O14931 201 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 UBR5O95071 2799 aaPredicted RBP11.14□□□□□ -0.63
KCNC4-206ENST00000469655 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 A0A087WW49 117 aa11.14□□□□□ -0.63
KCNC4-206ENST00000469655 A0A0J9YX75 114 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
KCNC4-206ENST00000469655 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
KCNC4-206ENST00000469655 SLPIP03973 132 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
KCNC4-206ENST00000469655 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
KCNC4-206ENST00000469655 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 SEC61GP60059 68 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
KCNC4-206ENST00000469655 UPK3BQ9BT76 320 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
KCNC4-206ENST00000469655 CFHR3Q02985 330 aa11.12□□□□□ -0.63
KCNC4-206ENST00000469655 DGAT2L7PQ6IED9 249 aa11.12□□□□□ -0.63
KCNC4-206ENST00000469655 M0QY20 66 aa11.11□□□□□ -0.63
KCNC4-206ENST00000469655 DEFB131AP59861 70 aa11.11□□□□□ -0.63
KCNC4-206ENST00000469655 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
KCNC4-206ENST00000469655 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
KCNC4-206ENST00000469655 HELZ2Q9BYK8 2649 aaKnown RBP11.1□□□□□ -0.63
KCNC4-206ENST00000469655 ATRQ13535 2644 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 SLURP1P55000 103 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 FAM19A1Q7Z5A9 133 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 U3KQE9 123 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 V9GYY9 64 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 NDUFA4O00483 81 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 IGHG2P01859 326 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 APCP25054 2843 aa11.09□□□□□ -0.63
KCNC4-206ENST00000469655 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
KCNC4-206ENST00000469655 ENHOQ6UWT2 76 aa11.08□□□□□ -0.64
KCNC4-206ENST00000469655 SETXQ7Z333 2677 aaKnown RBP11.08□□□□□ -0.64
KCNC4-206ENST00000469655 A6NDX4 124 aa11.08□□□□□ -0.64
KCNC4-206ENST00000469655 HIST2H2BCQ6DN03 193 aa11.08□□□□□ -0.64
KCNC4-206ENST00000469655 SOSTDC1Q6X4U4 206 aa11.07□□□□□ -0.64
KCNC4-206ENST00000469655 NBPF19A0A087WUL8 3843 aa11.07□□□□□ -0.64
KCNC4-206ENST00000469655 B4DSR2 109 aa11.07□□□□□ -0.64
KCNC4-206ENST00000469655 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
KCNC4-206ENST00000469655 RBM3P98179 157 aaKnown RBP11.07□□□□□ -0.64
KCNC4-206ENST00000469655 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
KCNC4-206ENST00000469655 A0A087WYN8 130 aa11.06□□□□□ -0.64
KCNC4-206ENST00000469655 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
KCNC4-206ENST00000469655 F8WDY8 70 aa11.06□□□□□ -0.64
KCNC4-206ENST00000469655 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
KCNC4-206ENST00000469655 C11orf68Q9H3H3 251 aaKnown RBP11.06□□□□□ -0.64
KCNC4-206ENST00000469655 LINC00474Q9P2X8 69 aa11.06□□□□□ -0.64
KCNC4-206ENST00000469655 F8P00451 2351 aa11.06□□□□□ -0.64
KCNC4-206ENST00000469655 MRPL53Q96EL3 112 aaKnown RBP11.05□□□□□ -0.64
KCNC4-206ENST00000469655 USMG5Q96IX5 58 aa11.05□□□□□ -0.64
KCNC4-206ENST00000469655 LECT2O14960 151 aa11.05□□□□□ -0.64
KCNC4-206ENST00000469655 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
KCNC4-206ENST00000469655 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
KCNC4-206ENST00000469655 C19orf54Q5BKX5 351 aa11.05□□□□□ -0.64
KCNC4-206ENST00000469655 LENEPQ9Y5L5 61 aa11.05□□□□□ -0.64
KCNC4-206ENST00000469655 C9orf85Q96MD7 179 aa11.04□□□□□ -0.64
KCNC4-206ENST00000469655 SOCS3O14543 225 aa11.04□□□□□ -0.64
KCNC4-206ENST00000469655 TEP1Q99973 2627 aaKnown RBP11.04□□□□□ -0.64
KCNC4-206ENST00000469655 XCL1P47992 114 aa11.04□□□□□ -0.64
KCNC4-206ENST00000469655 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
KCNC4-206ENST00000469655 TOMM7Q9P0U1 55 aa11.04□□□□□ -0.64
KCNC4-206ENST00000469655 CRPP02741 224 aa11.03□□□□□ -0.64
KCNC4-206ENST00000469655 Q6JHZ5 121 aa11.03□□□□□ -0.64
KCNC4-206ENST00000469655 S100A7L2Q5SY68 101 aa11.03□□□□□ -0.64
KCNC4-206ENST00000469655 BEAN1Q3B7T3 259 aa11.02□□□□□ -0.65
KCNC4-206ENST00000469655 UBE2D4Q9Y2X8 147 aa11.02□□□□□ -0.65
KCNC4-206ENST00000469655 COX6A2Q02221 97 aa11.01□□□□□ -0.65
KCNC4-206ENST00000469655 TRBV6-5A0A0K0K1A5 114 aa11.01□□□□□ -0.65
KCNC4-206ENST00000469655 NDUFC2O95298 119 aa11.01□□□□□ -0.65
KCNC4-206ENST00000469655 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
KCNC4-206ENST00000469655 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
KCNC4-206ENST00000469655 SS18Q15532 418 aa11.01□□□□□ -0.65
KCNC4-206ENST00000469655 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
KCNC4-206ENST00000469655 MED14OSP0DP75 135 aa11□□□□□ -0.65
KCNC4-206ENST00000469655 DYNLRB2Q8TF09 96 aa11□□□□□ -0.65
KCNC4-206ENST00000469655 PLA2G2AP14555 144 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 RMI2Q96E14 147 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 NDUFA1O15239 70 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
KCNC4-206ENST00000469655 Q6ZSN1 163 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms