RNA–Protein interactions for RNA: ENST00000469077.1

PTPN22-204, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-204ENST00000469077 K7ERU9 68 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 MGPP08493 103 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 APLNQ9ULZ1 77 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 HTTP42858 3142 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 MYH13Q9UKX3 1938 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 VPS13BQ7Z7G8 4022 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 ITPR3Q14573 2671 aa-1.13□□□□□ -2.59
PTPN22-204ENST00000469077 CUBNO60494 3623 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 LOC285095A0A1B0GVY8 99 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 CPSF4LA6NMK7 179 aaKnown RBP-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 RPS25P62851 125 aaKnown RBP-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 LSM10Q969L4 123 aaKnown RBP-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 TCEAL4Q96EI5 215 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 SELENOSQ9BQE4 189 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 NAA60Q9H7X0 242 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 CCDC167Q9P0B6 97 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 RNF213Q63HN8 5207 aa-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 USP9YO00507 2555 aaPredicted RBP-1.14□□□□□ -2.59
PTPN22-204ENST00000469077 ARAP2Q8WZ64 1704 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 HECTD1Q9ULT8 2610 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 DOCK1Q14185 1865 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 CDK5RAP2Q96SN8 1893 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 MYOM1P52179 1685 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 CFTRP13569 1480 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 ARPC5O15511 151 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 HIST1H1DP16402 221 aaKnown RBP-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 B2MP61769 119 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 COPZ1P61923 177 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 SMCO1Q147U7 214 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 MRPL54Q6P161 138 aaKnown RBP-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 TSLPQ969D9 159 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 PTPN23Q9H3S7 1636 aa-1.15□□□□□ -2.59
PTPN22-204ENST00000469077 ADAMTS12P58397 1594 aa-1.16□□□□□ -2.59
PTPN22-204ENST00000469077 GRIN2AQ12879 1464 aa-1.16□□□□□ -2.59
PTPN22-204ENST00000469077 DNAH2Q9P225 4427 aa-1.16□□□□□ -2.59
PTPN22-204ENST00000469077 IGLC1P0CG04 106 aa-1.16□□□□□ -2.6
PTPN22-204ENST00000469077 H1FX-AS1Q4G0G2 97 aa-1.16□□□□□ -2.6
PTPN22-204ENST00000469077 FAM167A-AS1Q96KT0 104 aa-1.16□□□□□ -2.6
PTPN22-204ENST00000469077 LINC01600Q96MT4 127 aa-1.16□□□□□ -2.6
PTPN22-204ENST00000469077 SERP1Q9Y6X1 66 aa-1.16□□□□□ -2.6
PTPN22-204ENST00000469077 DOPEY1Q5JWR5 2465 aa-1.16□□□□□ -2.6
PTPN22-204ENST00000469077 RYR2Q92736 4967 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 LAMA1P25391 3075 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 MYOZ3Q8TDC0 251 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 COPS9Q8WXC6 57 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 SPANXDQ9BXN6 97 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 RERGLQ9H628 205 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 TPT1P8Q9HAU6 139 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 NXT2Q9NPJ8 142 aaKnown RBP-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 CDC42SE2Q9NRR3 84 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 PATJQ8NI35 1801 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 ARHGEF5Q12774 1597 aa-1.17□□□□□ -2.6
PTPN22-204ENST00000469077 NKTRP30414 1462 aaKnown RBP-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 APOBP04114 4563 aaKnown RBP-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 WHAMMP3Q1A5X7 153 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 TSTD1Q8NFU3 115 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 PYDC1Q8WXC3 89 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 PDCD10Q9BUL8 212 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 SNRNP25Q9BV90 132 aaKnown RBP-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 COPZ2Q9P299 210 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 CPSF1Q10570 1443 aaKnown RBP-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 SMG6Q86US8 1419 aaKnown RBP-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 PI4KAP42356 2102 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 MYO18BQ8IUG5 2567 aa-1.18□□□□□ -2.6
PTPN22-204ENST00000469077 TET3O43151 1660 aa-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 UBA52P62987 128 aaKnown RBP-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 TEP1Q99973 2627 aaKnown RBP-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 FAIMQ9NVQ4 179 aa-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 ANK3Q12955 4377 aaKnown RBP-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 PAPPA2Q9BXP8 1791 aa-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 C1orf167Q5SNV9 1468 aa-1.19□□□□□ -2.6
PTPN22-204ENST00000469077 LAMA2P24043 3122 aaKnown RBP-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 MYH6P13533 1939 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 TROQ12816 1431 aaPredicted RBP-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 SSSCA1O60232 199 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 PLECQ15149 4684 aaKnown RBP-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 COMMD6Q7Z4G1 85 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 FAM223AQ8IWN6 122 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 LCN9Q8WX39 176 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 ANP32BQ92688 251 aaKnown RBP-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 PPP3R2Q96LZ3 170 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 PRO1933Q9H354 126 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 AKAP13Q12802 2813 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 CCDC141Q6ZP82 1450 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 A0A0G2JMZ2 1700 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 FMN2Q9NZ56 1722 aa-1.2□□□□□ -2.6
PTPN22-204ENST00000469077 FASNP49327 2511 aaKnown RBP-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 CHKB-CPT1BH3BT56 60 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 SMIM21Q3B7S5 101 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 FDCSPQ8NFU4 85 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 LINC00474Q9P2X8 69 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 MYH8P13535 1937 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 SLIT1O75093 1534 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 EHBP1L1Q8N3D4 1523 aa-1.21□□□□□ -2.6
PTPN22-204ENST00000469077 SHROOM2Q13796 1616 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 ADGRL2O95490 1459 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 SPG11Q96JI7 2443 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 LOC100130705A0A1B0GUX0 176 aa-1.22□□□□□ -2.6
PTPN22-204ENST00000469077 BTG2P78543 158 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms