RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 VCX2Q9H322 139 aa11.88□□□□□ -0.51
RPL39-202ENST00000468844 SACSQ9NZJ4 4579 aa11.88□□□□□ -0.51
RPL39-202ENST00000468844 HYDINQ4G0P3 5121 aa11.88□□□□□ -0.51
RPL39-202ENST00000468844 PMVKQ15126 192 aa11.88□□□□□ -0.51
RPL39-202ENST00000468844 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
RPL39-202ENST00000468844 Q9H8V8 135 aa11.87□□□□□ -0.51
RPL39-202ENST00000468844 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 ODF1Q14990 250 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 CLPSL2Q6UWE3 100 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 KLK12Q9UKR0 248 aa11.86□□□□□ -0.51
RPL39-202ENST00000468844 IGKV3OR2-268A0A0C4DH90 116 aa11.84□□□□□ -0.51
RPL39-202ENST00000468844 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
RPL39-202ENST00000468844 SEC11AP67812 179 aa11.83□□□□□ -0.52
RPL39-202ENST00000468844 REG3AQ06141 175 aa11.83□□□□□ -0.52
RPL39-202ENST00000468844 VAMP3Q15836 100 aa11.83□□□□□ -0.52
RPL39-202ENST00000468844 PRR34Q9NV39 138 aa11.83□□□□□ -0.52
RPL39-202ENST00000468844 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
RPL39-202ENST00000468844 UBE2D1P51668 147 aa11.82□□□□□ -0.52
RPL39-202ENST00000468844 CHTOPQ9Y3Y2 248 aaKnown RBP11.82□□□□□ -0.52
RPL39-202ENST00000468844 IGLV4-69A0A075B6H9 119 aa11.82□□□□□ -0.52
RPL39-202ENST00000468844 F8VRH5 84 aa11.82□□□□□ -0.52
RPL39-202ENST00000468844 NMUP48645 174 aa11.81□□□□□ -0.52
RPL39-202ENST00000468844 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
RPL39-202ENST00000468844 PCP2Q8IVA1 136 aa11.81□□□□□ -0.52
RPL39-202ENST00000468844 KMT2CQ8NEZ4 4911 aaKnown RBP11.8□□□□□ -0.52
RPL39-202ENST00000468844 IGKCP01834 107 aa11.8□□□□□ -0.52
RPL39-202ENST00000468844 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
RPL39-202ENST00000468844 A0A0J9YXV3 536 aa11.8□□□□□ -0.52
RPL39-202ENST00000468844 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
RPL39-202ENST00000468844 HSD52Q0P140 79 aa11.8□□□□□ -0.52
RPL39-202ENST00000468844 KRTAP1-5Q9BYS1 174 aa11.8□□□□□ -0.52
RPL39-202ENST00000468844 DPM2O94777 84 aa11.79□□□□□ -0.52
RPL39-202ENST00000468844 CRPP02741 224 aa11.79□□□□□ -0.52
RPL39-202ENST00000468844 LINC00242Q5T6M2 205 aa11.79□□□□□ -0.52
RPL39-202ENST00000468844 FRAS1Q86XX4 4008 aa11.79□□□□□ -0.52
RPL39-202ENST00000468844 FAM19A3Q7Z5A8 133 aa11.78□□□□□ -0.52
RPL39-202ENST00000468844 LINC00476Q8WZB0 136 aa11.78□□□□□ -0.52
RPL39-202ENST00000468844 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
RPL39-202ENST00000468844 IGKV2D-26A0A0A0MRZ7 120 aa11.77□□□□□ -0.53
RPL39-202ENST00000468844 C11orf86A6NJI1 115 aa11.77□□□□□ -0.53
RPL39-202ENST00000468844 C10orf126Q8N4M7 172 aa11.77□□□□□ -0.53
RPL39-202ENST00000468844 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.53
RPL39-202ENST00000468844 A6NDN8 102 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 K7EP13 123 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 COX6A2Q02221 97 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 PLNP26678 52 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 MIAQ16674 131 aa11.76□□□□□ -0.53
RPL39-202ENST00000468844 H3BRM9 83 aa11.75□□□□□ -0.53
RPL39-202ENST00000468844 LY6G6CO95867 125 aa11.75□□□□□ -0.53
RPL39-202ENST00000468844 SS18Q15532 418 aa11.75□□□□□ -0.53
RPL39-202ENST00000468844 HIGD1BQ9P298 99 aa11.75□□□□□ -0.53
RPL39-202ENST00000468844 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
RPL39-202ENST00000468844 NBDYA0A0U1RRE5 68 aa11.74□□□□□ -0.53
RPL39-202ENST00000468844 XCL1P47992 114 aa11.74□□□□□ -0.53
RPL39-202ENST00000468844 HERVK_113P63121 156 aa11.74□□□□□ -0.53
RPL39-202ENST00000468844 Q9HAA7 133 aa11.74□□□□□ -0.53
RPL39-202ENST00000468844 TRAV8-4A0A0B4J246 113 aa11.73□□□□□ -0.53
RPL39-202ENST00000468844 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
RPL39-202ENST00000468844 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
RPL39-202ENST00000468844 C9orf118A6NHY6 69 aa11.72□□□□□ -0.53
RPL39-202ENST00000468844 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
RPL39-202ENST00000468844 CDKN2A-AS1Q9UH64 79 aa11.72□□□□□ -0.53
RPL39-202ENST00000468844 TRAV8-3A0A0A6YYJ7 113 aa11.72□□□□□ -0.53
RPL39-202ENST00000468844 IGHV3OR16-9A0A0B4J2B5 98 aa11.72□□□□□ -0.53
RPL39-202ENST00000468844 TTTY13Q9BZ97 58 aa11.72□□□□□ -0.53
RPL39-202ENST00000468844 TMEM170BQ5T4T1 132 aa11.71□□□□□ -0.53
RPL39-202ENST00000468844 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
RPL39-202ENST00000468844 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
RPL39-202ENST00000468844 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
RPL39-202ENST00000468844 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
RPL39-202ENST00000468844 CBY1Q9Y3M2 126 aa11.7□□□□□ -0.54
RPL39-202ENST00000468844 DNAH17Q9UFH2 4485 aa11.69□□□□□ -0.54
RPL39-202ENST00000468844 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
RPL39-202ENST00000468844 M0R2N4 97 aa11.68□□□□□ -0.54
RPL39-202ENST00000468844 FOXI1Q12951 378 aa11.68□□□□□ -0.54
RPL39-202ENST00000468844 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
RPL39-202ENST00000468844 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
RPL39-202ENST00000468844 C5orf38Q86SI9 138 aa11.68□□□□□ -0.54
RPL39-202ENST00000468844 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
RPL39-202ENST00000468844 H3BUT2 72 aa11.67□□□□□ -0.54
RPL39-202ENST00000468844 RYR2Q92736 4967 aa11.67□□□□□ -0.54
RPL39-202ENST00000468844 A0A087WZ39 114 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 GCSHP23434 173 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 Q6ZR54 194 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 MAPKAPK5-AS1Q8N8E1 139 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 SPINK8P0C7L1 97 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 FXYD2P54710 66 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 GTF2H5Q6ZYL4 71 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
RPL39-202ENST00000468844 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
RPL39-202ENST00000468844 SMIM1B2RUZ4 78 aa11.64□□□□□ -0.55
RPL39-202ENST00000468844 FAT2Q9NYQ8 4349 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 312.1 ms