RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 IFITM1P13164 125 aa7.06□□□□□ -1.28
MSH5-213ENST00000468136 TSPEAR-AS2P59090 65 aa7.06□□□□□ -1.28
MSH5-213ENST00000468136 RPL24P83731 157 aaKnown RBP7.06□□□□□ -1.28
MSH5-213ENST00000468136 IGLV4-60A0A075B6I1 120 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 A0A087WZ39 114 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 LINC00959A0A1B0GUT2 108 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 SMIM1B2RUZ4 78 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 HTN3P15516 51 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 SPANXDQ9BXN6 97 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 VWFP04275 2813 aa7.05□□□□□ -1.28
MSH5-213ENST00000468136 TRAV8-3A0A0A6YYJ7 113 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.04□□□□□ -1.28
MSH5-213ENST00000468136 TRAV10A0A0B4J240 114 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 IGHV3OR16-9A0A0B4J2B5 98 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 A0A0J9YWU9 116 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 K7EIL1 84 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 FXYD2P54710 66 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 COX6A2Q02221 97 aa7.04□□□□□ -1.28
MSH5-213ENST00000468136 MAST4O15021 2626 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 DEFB131BA0A096LNP1 70 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 LYRM7Q5U5X0 104 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 CD164L2Q6UWJ8 174 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 LYPD5Q6UWN5 251 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 C10orf126Q8N4M7 172 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 RETNQ9HD89 108 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 STAB1Q9NY15 2570 aa7.03□□□□□ -1.28
MSH5-213ENST00000468136 IGHV3-64A0A075B6Q5 118 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 TRAV8-4A0A0B4J246 113 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 CXCL5P42830 114 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 DEFB121Q5J5C9 76 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 Q6ZTC4 211 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 GTF2H5Q6ZYL4 71 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 NHP2Q9NX24 153 aaKnown RBP7.02□□□□□ -1.29
MSH5-213ENST00000468136 COL6A5A8TX70 2615 aa7.02□□□□□ -1.29
MSH5-213ENST00000468136 ANGP03950 147 aaKnown RBP7.01□□□□□ -1.29
MSH5-213ENST00000468136 FABP2P12104 132 aa7.01□□□□□ -1.29
MSH5-213ENST00000468136 REG3AQ06141 175 aa7.01□□□□□ -1.29
MSH5-213ENST00000468136 VAMP3Q15836 100 aa7.01□□□□□ -1.29
MSH5-213ENST00000468136 MIAQ16674 131 aa7.01□□□□□ -1.29
MSH5-213ENST00000468136 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
MSH5-213ENST00000468136 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
MSH5-213ENST00000468136 A0A0B4J2C4 111 aa7□□□□□ -1.29
MSH5-213ENST00000468136 APOMO95445 188 aa7□□□□□ -1.29
MSH5-213ENST00000468136 UBE2V1Q13404 147 aa7□□□□□ -1.29
MSH5-213ENST00000468136 Q8IZM0 81 aa7□□□□□ -1.29
MSH5-213ENST00000468136 MUC7Q8TAX7 377 aa7□□□□□ -1.29
MSH5-213ENST00000468136 ZNF625Q96I27 306 aaPredicted RBP7□□□□□ -1.29
MSH5-213ENST00000468136 MDFIQ99750 246 aa7□□□□□ -1.29
MSH5-213ENST00000468136 Q9H8V8 135 aa7□□□□□ -1.29
MSH5-213ENST00000468136 FBN1P35555 2871 aaKnown RBP7□□□□□ -1.29
MSH5-213ENST00000468136 DNAH3Q8TD57 4116 aa6.99□□□□□ -1.29
MSH5-213ENST00000468136 COX7A2LO14548 114 aa6.99□□□□□ -1.29
MSH5-213ENST00000468136 NHLRC4P0CG21 123 aaPredicted RBP6.99□□□□□ -1.29
MSH5-213ENST00000468136 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
MSH5-213ENST00000468136 LITAFQ99732 161 aa6.99□□□□□ -1.29
MSH5-213ENST00000468136 IGKV3OR2-268A0A0C4DH90 116 aa6.98□□□□□ -1.29
MSH5-213ENST00000468136 A0A1W2PPM0 123 aa6.98□□□□□ -1.29
MSH5-213ENST00000468136 IBA57-AS1B1ANH7 110 aa6.98□□□□□ -1.29
MSH5-213ENST00000468136 CRPP02741 224 aa6.98□□□□□ -1.29
MSH5-213ENST00000468136 PRSS2P07478 247 aa6.98□□□□□ -1.29
MSH5-213ENST00000468136 NANOS2P60321 138 aaKnown RBP6.98□□□□□ -1.29
MSH5-213ENST00000468136 B9D2Q9BPU9 175 aa6.98□□□□□ -1.29
MSH5-213ENST00000468136 CMYA5Q8N3K9 4069 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 GAGE10A6NGK3 116 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 IGLL5B9A064 214 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 H3BUT2 72 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 K7EP13 123 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 KRTAP21-3Q3LHN1 58 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 CHCHD10Q8WYQ3 142 aaPredicted RBP6.97□□□□□ -1.29
MSH5-213ENST00000468136 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 PRO1854Q9UHT4 67 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 ANK2Q01484 3957 aa6.97□□□□□ -1.29
MSH5-213ENST00000468136 F8WDY8 70 aa6.96□□□□□ -1.3
MSH5-213ENST00000468136 MALP21145 153 aa6.96□□□□□ -1.3
MSH5-213ENST00000468136 XCL1P47992 114 aa6.96□□□□□ -1.3
MSH5-213ENST00000468136 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
MSH5-213ENST00000468136 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
MSH5-213ENST00000468136 KLK5Q9Y337 293 aaPredicted RBP6.96□□□□□ -1.3
MSH5-213ENST00000468136 A4D1N5 150 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 K7EP34 96 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 CFC1BP0CG36 223 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 CFC1P0CG37 223 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 CCL18P55774 89 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 COX17Q14061 63 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 MRAPQ8TCY5 172 aa6.95□□□□□ -1.3
MSH5-213ENST00000468136 TRBV20-1A0A075B6N2 111 aa6.94□□□□□ -1.3
MSH5-213ENST00000468136 CKS1BP61024 79 aa6.94□□□□□ -1.3
MSH5-213ENST00000468136 ESRGQ1W209 222 aa6.94□□□□□ -1.3
MSH5-213ENST00000468136 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
MSH5-213ENST00000468136 PGPEP1Q9NXJ5 209 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms