RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 C15orf53Q8NAA6 179 aa14.05□□□□□ -0.16
TMEM53-207ENST00000468117 ZNF815PA8K554 130 aa14.05□□□□□ -0.16
TMEM53-207ENST00000468117 IGHV1-58A0A0C4DH39 117 aa14.04□□□□□ -0.16
TMEM53-207ENST00000468117 SNHG12Q9BXW3 62 aa14.04□□□□□ -0.16
TMEM53-207ENST00000468117 EREGO14944 169 aa14.03□□□□□ -0.16
TMEM53-207ENST00000468117 SIVA1O15304 175 aa14.03□□□□□ -0.16
TMEM53-207ENST00000468117 LGALS3P17931 250 aaKnown RBP14.03□□□□□ -0.16
TMEM53-207ENST00000468117 IGHV3-30P01768 117 aa14.03□□□□□ -0.16
TMEM53-207ENST00000468117 IGHV3-33P01772 117 aa14.03□□□□□ -0.16
TMEM53-207ENST00000468117 IGHV3-30-5P0DP03 117 aa14.03□□□□□ -0.16
TMEM53-207ENST00000468117 REG3AQ06141 175 aa14.03□□□□□ -0.16
TMEM53-207ENST00000468117 PLEKHB2Q96CS7 222 aa14.02□□□□□ -0.16
TMEM53-207ENST00000468117 CSMD3Q7Z407 3707 aa14.02□□□□□ -0.16
TMEM53-207ENST00000468117 M0R143 59 aa14.02□□□□□ -0.17
TMEM53-207ENST00000468117 HINT1P49773 126 aaPredicted RBP14.01□□□□□ -0.17
TMEM53-207ENST00000468117 SS18Q15532 418 aa14.01□□□□□ -0.17
TMEM53-207ENST00000468117 BATFQ16520 125 aa14.01□□□□□ -0.17
TMEM53-207ENST00000468117 KLK12Q9UKR0 248 aa14.01□□□□□ -0.17
TMEM53-207ENST00000468117 IGHV3OR16-9A0A0B4J2B5 98 aa14□□□□□ -0.17
TMEM53-207ENST00000468117 SMIM1B2RUZ4 78 aa14□□□□□ -0.17
TMEM53-207ENST00000468117 CCL25O15444 150 aa14□□□□□ -0.17
TMEM53-207ENST00000468117 XCL1P47992 114 aa14□□□□□ -0.17
TMEM53-207ENST00000468117 HIGD1BQ9P298 99 aa14□□□□□ -0.17
TMEM53-207ENST00000468117 IGLV10-54A0A075B6I4 117 aa13.98□□□□□ -0.17
TMEM53-207ENST00000468117 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
TMEM53-207ENST00000468117 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
TMEM53-207ENST00000468117 C5orf38Q86SI9 138 aa13.97□□□□□ -0.17
TMEM53-207ENST00000468117 PRR34Q9NV39 138 aa13.97□□□□□ -0.17
TMEM53-207ENST00000468117 LINC00588Q9Y4M8 146 aa13.97□□□□□ -0.17
TMEM53-207ENST00000468117 LYSTQ99698 3801 aa13.96□□□□□ -0.17
TMEM53-207ENST00000468117 FBN3Q75N90 2809 aa13.96□□□□□ -0.17
TMEM53-207ENST00000468117 ENHOQ6UWT2 76 aa13.95□□□□□ -0.18
TMEM53-207ENST00000468117 CHCHD10Q8WYQ3 142 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-207ENST00000468117 TENM2Q9NT68 2774 aa13.95□□□□□ -0.18
TMEM53-207ENST00000468117 A0A087WZ39 114 aa13.95□□□□□ -0.18
TMEM53-207ENST00000468117 NDUFA12Q9UI09 145 aa13.95□□□□□ -0.18
TMEM53-207ENST00000468117 DYNC2H1Q8NCM8 4307 aaKnown RBP13.95□□□□□ -0.18
TMEM53-207ENST00000468117 CCL18P55774 89 aa13.94□□□□□ -0.18
TMEM53-207ENST00000468117 BVES-AS1Q5T3Y7 98 aa13.94□□□□□ -0.18
TMEM53-207ENST00000468117 ZFAND6Q6FIF0 208 aa13.94□□□□□ -0.18
TMEM53-207ENST00000468117 DNAH7Q8WXX0 4024 aa13.94□□□□□ -0.18
TMEM53-207ENST00000468117 HSD52Q0P140 79 aa13.93□□□□□ -0.18
TMEM53-207ENST00000468117 C10orf126Q8N4M7 172 aa13.93□□□□□ -0.18
TMEM53-207ENST00000468117 UBE2WQ96B02 151 aa13.93□□□□□ -0.18
TMEM53-207ENST00000468117 LINC01556Q5JQF7 62 aa13.93□□□□□ -0.18
TMEM53-207ENST00000468117 CRPP02741 224 aa13.92□□□□□ -0.18
TMEM53-207ENST00000468117 CD164L2Q6UWJ8 174 aa13.92□□□□□ -0.18
TMEM53-207ENST00000468117 HIST1H4GQ99525 98 aa13.9□□□□□ -0.18
TMEM53-207ENST00000468117 A0A0J9YXY3 114 aa13.9□□□□□ -0.18
TMEM53-207ENST00000468117 TOMM7Q9P0U1 55 aa13.9□□□□□ -0.18
TMEM53-207ENST00000468117 DNAH10OSP0CZ25 163 aa13.89□□□□□ -0.19
TMEM53-207ENST00000468117 NDUFA1O15239 70 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 GCSHP23434 173 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 Q9H8V8 135 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 TGP01266 2768 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 COX7A2LO14548 114 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 FOXI1Q12951 378 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 COX7B2Q8TF08 81 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 APLNQ9ULZ1 77 aa13.88□□□□□ -0.19
TMEM53-207ENST00000468117 GAGE12HA6NDE8 117 aa13.87□□□□□ -0.19
TMEM53-207ENST00000468117 LBHQ53QV2 105 aaPredicted RBP13.87□□□□□ -0.19
TMEM53-207ENST00000468117 SRSF9Q13242 221 aaKnown RBP eCLIP13.86□□□□□ -0.19
TMEM53-207ENST00000468117 MIAQ16674 131 aa13.86□□□□□ -0.19
TMEM53-207ENST00000468117 CEND1Q8N111 149 aa13.86□□□□□ -0.19
TMEM53-207ENST00000468117 PLECQ15149 4684 aaKnown RBP13.86□□□□□ -0.19
TMEM53-207ENST00000468117 TAL2Q16559 108 aa13.86□□□□□ -0.19
TMEM53-207ENST00000468117 ORAOV1Q8WV07 137 aa13.86□□□□□ -0.19
TMEM53-207ENST00000468117 TRAV8-4A0A0B4J246 113 aa13.85□□□□□ -0.19
TMEM53-207ENST00000468117 K7EP13 123 aa13.85□□□□□ -0.19
TMEM53-207ENST00000468117 ZNF625Q96I27 306 aaPredicted RBP13.85□□□□□ -0.19
TMEM53-207ENST00000468117 NUPR2A6NF83 97 aa13.85□□□□□ -0.19
TMEM53-207ENST00000468117 FXYD2P54710 66 aa13.85□□□□□ -0.19
TMEM53-207ENST00000468117 UPK3BQ9BT76 320 aa13.85□□□□□ -0.19
TMEM53-207ENST00000468117 STARD9Q9P2P6 4700 aa13.84□□□□□ -0.19
TMEM53-207ENST00000468117 MALP21145 153 aa13.84□□□□□ -0.19
TMEM53-207ENST00000468117 COL5A1-AS1Q5SY13 56 aa13.84□□□□□ -0.19
TMEM53-207ENST00000468117 LINC01561Q8N1V8 128 aa13.84□□□□□ -0.19
TMEM53-207ENST00000468117 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
TMEM53-207ENST00000468117 TM2D2Q9BX73 214 aa13.83□□□□□ -0.2
TMEM53-207ENST00000468117 LITAFQ99732 161 aa13.82□□□□□ -0.2
TMEM53-207ENST00000468117 KLK5Q9Y337 293 aaPredicted RBP13.82□□□□□ -0.2
TMEM53-207ENST00000468117 TMEM238C9JI98 176 aa13.81□□□□□ -0.2
TMEM53-207ENST00000468117 PTTG1IPP53801 180 aa13.81□□□□□ -0.2
TMEM53-207ENST00000468117 C6orf226Q5I0X4 101 aa13.81□□□□□ -0.2
TMEM53-207ENST00000468117 ADAMTSL4-AS1Q5T5F5 129 aa13.81□□□□□ -0.2
TMEM53-207ENST00000468117 KRTAP26-1Q6PEX3 210 aa13.8□□□□□ -0.2
TMEM53-207ENST00000468117 Q8IZM0 81 aa13.8□□□□□ -0.2
TMEM53-207ENST00000468117 Q9HAA7 133 aa13.8□□□□□ -0.2
TMEM53-207ENST00000468117 PRSS2P07478 247 aa13.79□□□□□ -0.2
TMEM53-207ENST00000468117 UBE2DNLQ8IWF7 75 aa13.79□□□□□ -0.2
TMEM53-207ENST00000468117 C1orf43Q9BWL3 253 aa13.79□□□□□ -0.2
TMEM53-207ENST00000468117 HERV-K104P63124 156 aa13.78□□□□□ -0.2
TMEM53-207ENST00000468117 A0A0U1RRA0 63 aa13.78□□□□□ -0.2
TMEM53-207ENST00000468117 DNAH1Q9P2D7 4330 aa13.77□□□□□ -0.2
TMEM53-207ENST00000468117 IGKV2D-24A0A075B6R9 120 aa13.77□□□□□ -0.21
TMEM53-207ENST00000468117 A6NDN8 102 aa13.77□□□□□ -0.21
TMEM53-207ENST00000468117 KIAA0087Q14695 138 aa13.77□□□□□ -0.21
TMEM53-207ENST00000468117 MEIG1Q5JSS6 88 aa13.77□□□□□ -0.21
TMEM53-207ENST00000468117 DAND5Q8N907 189 aa13.77□□□□□ -0.21
TMEM53-207ENST00000468117 IBA57-AS1B1ANH7 110 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms