RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TRBV10-1A0A0K0K1A3 114 aa10.49□□□□□ -0.73
PRPF38B-204ENST00000467302 SMIM1B2RUZ4 78 aa10.49□□□□□ -0.73
PRPF38B-204ENST00000467302 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
PRPF38B-204ENST00000467302 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 DEFB121Q5J5C9 76 aa10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 K7EQD1 137 aa10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 SNCGO76070 127 aa10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 DAZ2Q13117 558 aaKnown RBP10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
PRPF38B-204ENST00000467302 SETXQ7Z333 2677 aaKnown RBP10.47□□□□□ -0.73
PRPF38B-204ENST00000467302 PF4P02776 101 aa10.47□□□□□ -0.73
PRPF38B-204ENST00000467302 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
PRPF38B-204ENST00000467302 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
PRPF38B-204ENST00000467302 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
PRPF38B-204ENST00000467302 NSD1Q96L73 2696 aaPredicted RBP10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 F5H768 121 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 GAGE2BQ13066 116 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 GAGE2EQ4V326 116 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 SOSTDC1Q6X4U4 206 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 Q6ZTI0 123 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 ANAPC13Q9BS18 74 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 CDC42SE2Q9NRR3 84 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 GAGE2DQ9UEU5 116 aa10.46□□□□□ -0.73
PRPF38B-204ENST00000467302 TRAV13-1A0A0B4J241 112 aa10.45□□□□□ -0.74
PRPF38B-204ENST00000467302 Q6Q795 121 aa10.45□□□□□ -0.74
PRPF38B-204ENST00000467302 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
PRPF38B-204ENST00000467302 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
PRPF38B-204ENST00000467302 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
PRPF38B-204ENST00000467302 SHISA2Q6UWI4 295 aa10.45□□□□□ -0.74
PRPF38B-204ENST00000467302 COPS9Q8WXC6 57 aa10.44□□□□□ -0.74
PRPF38B-204ENST00000467302 C15orf53Q8NAA6 179 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 C19orf73Q9NVV2 129 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 COX7A2LO14548 114 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 PRIMA1Q86XR5 153 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 WFDC10AQ9H1F0 79 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 PPDPFQ9H3Y8 114 aa10.43□□□□□ -0.74
PRPF38B-204ENST00000467302 NIPBLQ6KC79 2804 aaeCLIP10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 GAGE12JA6NER3 117 aa10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 GIG44P09565 113 aaPredicted RBP10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 GAGE4Q13068 117 aa10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 GAGE5Q13069 117 aa10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
PRPF38B-204ENST00000467302 FN1P02751 2386 aaKnown RBP10.41□□□□□ -0.74
PRPF38B-204ENST00000467302 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
PRPF38B-204ENST00000467302 HERV-K104P63124 156 aa10.41□□□□□ -0.74
PRPF38B-204ENST00000467302 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
PRPF38B-204ENST00000467302 PLAC8L1A1L4L8 177 aa10.4□□□□□ -0.74
PRPF38B-204ENST00000467302 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
PRPF38B-204ENST00000467302 C2CD3Q4AC94 2353 aa10.4□□□□□ -0.75
PRPF38B-204ENST00000467302 HIVEP1P15822 2718 aa10.4□□□□□ -0.75
PRPF38B-204ENST00000467302 TMEM243Q9BU79 118 aa10.4□□□□□ -0.75
PRPF38B-204ENST00000467302 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
PRPF38B-204ENST00000467302 UBE2L6O14933 153 aa10.37□□□□□ -0.75
PRPF38B-204ENST00000467302 GAGE6Q13070 117 aa10.37□□□□□ -0.75
PRPF38B-204ENST00000467302 TRACP01848 142 aa10.36□□□□□ -0.75
PRPF38B-204ENST00000467302 C9orf66Q5T8R8 295 aa10.36□□□□□ -0.75
PRPF38B-204ENST00000467302 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
PRPF38B-204ENST00000467302 NOTCH3Q9UM47 2321 aa10.36□□□□□ -0.75
PRPF38B-204ENST00000467302 LOC100131303A0A0U1RQF7 123 aa10.36□□□□□ -0.75
PRPF38B-204ENST00000467302 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
PRPF38B-204ENST00000467302 JMJD1CQ15652 2540 aa10.35□□□□□ -0.75
PRPF38B-204ENST00000467302 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
PRPF38B-204ENST00000467302 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 GAGE7O76087 117 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 FAM218AQ96MZ4 157 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
PRPF38B-204ENST00000467302 TRBV7-7A0A0K0K1E9 115 aa10.33□□□□□ -0.76
PRPF38B-204ENST00000467302 ACYP1P07311 99 aa10.33□□□□□ -0.76
PRPF38B-204ENST00000467302 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
PRPF38B-204ENST00000467302 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
PRPF38B-204ENST00000467302 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
PRPF38B-204ENST00000467302 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 BAALC-AS2P0C853 105 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 MIR7-3HGQ8N6C7 128 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 IGLV4-60A0A075B6I1 120 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 LINC00337Q8N6G1 96 aa10.31□□□□□ -0.76
PRPF38B-204ENST00000467302 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
PRPF38B-204ENST00000467302 B5MCH6 92 aa10.3□□□□□ -0.76
PRPF38B-204ENST00000467302 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
PRPF38B-204ENST00000467302 FHL2Q14192 279 aa10.3□□□□□ -0.76
PRPF38B-204ENST00000467302 TRGV4A0A0C4DH28 118 aa10.29□□□□□ -0.76
PRPF38B-204ENST00000467302 CRPP02741 224 aa10.29□□□□□ -0.76
PRPF38B-204ENST00000467302 SDIM1Q6ZPB5 146 aa10.29□□□□□ -0.76
PRPF38B-204ENST00000467302 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
PRPF38B-204ENST00000467302 A0A087WZ39 114 aa10.28□□□□□ -0.76
PRPF38B-204ENST00000467302 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
PRPF38B-204ENST00000467302 TOMM7Q9P0U1 55 aa10.28□□□□□ -0.76
PRPF38B-204ENST00000467302 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
PRPF38B-204ENST00000467302 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms