RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ERCC6L2Q5T890 1561 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 SPINK6Q6UWN8 80 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 SPRR4Q96PI1 79 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 NSD3Q9BZ95 1437 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 CACFD1Q9UGQ2 172 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 NAV3Q8IVL0 2385 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 PLEKHH2Q8IVE3 1493 aa0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 MAGI1Q96QZ7 1491 aaPredicted RBP0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.36
GTF3C3-209ENST00000466862 A0A0D9SFI3 127 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 A0A1B0GWA3 101 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 H7BZZ5 65 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 KRTAP2-3P0C7H8 128 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 SAA2P0DJI9 122 aaPredicted RBP0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 C10orf113Q5VZT2 155 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 SERP2Q8N6R1 65 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 TMEM263Q8WUH6 116 aaKnown RBP0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 KRTAP2-4Q9BYR9 128 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 KRTAP2-1Q9BYU5 128 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 PLXNB2O15031 1838 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 WNK3Q9BYP7 1800 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 ARHGEF12Q9NZN5 1544 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 NUP188Q5SRE5 1749 aa0.33□□□□□ -2.36
GTF3C3-209ENST00000466862 TTC37Q6PGP7 1564 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 TROQ12816 1431 aaPredicted RBP0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 A0A087WVE0 104 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 TRBV7-7A0A0K0K1E9 115 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 UQCRHP07919 91 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 FAUP35544 74 aaKnown RBP0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 PMCHL1Q16048 86 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 PSMG4Q5JS54 123 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 FDCSPQ8NFU4 85 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 LCN9Q8WX39 176 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 TRGV9Q99603 122 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 SMR3AQ99954 134 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 PRO0255Q9UI72 69 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 RAPGEF2Q9Y4G8 1499 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 MARF1Q9Y4F3 1742 aaKnown RBP0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 BAZ1AQ9NRL2 1556 aaPredicted RBP0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 ASXL3Q9C0F0 2248 aa0.32□□□□□ -2.36
GTF3C3-209ENST00000466862 ANK2Q01484 3957 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 TTC28Q96AY4 2481 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 CACNA1HO95180 2353 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 C1orf167Q5SNV9 1468 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 NLRP1Q9C000 1473 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 NRXN1Q9ULB1 1477 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 MON2Q7Z3U7 1717 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 TRBV25-1A0A075B6N4 114 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 C7orf77A4D0Y5 90 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 SYS1-DBNDD2H3BUS1 97 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 CNFNQ9BYD5 112 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 SPCS1Q9Y6A9 102 aa0.31□□□□□ -2.36
GTF3C3-209ENST00000466862 UQCRHLA0A096LP55 91 aa0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 TRBV6-1A0A0K0K1D8 114 aa0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 I3L2K1 104 aa0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 LINC01600Q96MT4 127 aa0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 PRO1933Q9H354 126 aa0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 Q9H521 79 aa0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 PDCD11Q14690 1871 aaKnown RBP0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 CLTCQ00610 1675 aaKnown RBP0.3□□□□□ -2.36
GTF3C3-209ENST00000466862 MYO7BQ6PIF6 2116 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 POLA1P09884 1462 aaPredicted RBP0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 APCP25054 2843 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 TNCP24821 2201 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 PAPPAQ13219 1627 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 BIVM-ERCC5R4GMW8 1640 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 DEFB107AQ8IZN7 70 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 C20orf78Q9BR46 151 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 TP53AIP1Q9HCN2 124 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 LINC00846Q9NV44 126 aa0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 XRN1Q8IZH2 1706 aaKnown RBP0.29□□□□□ -2.36
GTF3C3-209ENST00000466862 FAM208BQ5VWN6 2430 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 KNDC1Q76NI1 1749 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 CACNA1CQ13936 2221 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 FXYD6-FXYD2A0A087WZ82 144 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 LINC00959A0A1B0GUT2 108 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 F8WEM9 126 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 SPINK1P00995 79 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 KRTAP21-1Q3LI58 79 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 ETDBQ3ZM63 59 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 Q5BKY6 102 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 Q8IZM0 81 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 HIGD1BQ9P298 99 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 V9GYS6 101 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 CACNA1EQ15878 2313 aa0.28□□□□□ -2.36
GTF3C3-209ENST00000466862 CEP162Q5TB80 1403 aa0.28□□□□□ -2.37
GTF3C3-209ENST00000466862 FANCAO15360 1455 aa0.28□□□□□ -2.37
GTF3C3-209ENST00000466862 EPRSP07814 1512 aaKnown RBP0.28□□□□□ -2.37
GTF3C3-209ENST00000466862 TULP4Q9NRJ4 1543 aa0.28□□□□□ -2.37
GTF3C3-209ENST00000466862 TRBV7-4A0A0J9YYF1 115 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 H3BQF6 201 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 GYPAP02724 150 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 ARMS2P0C7Q2 107 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 GNG2P59768 71 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 PIGYQ3MUY2 71 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 ZNF720Q7Z2F6 126 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 C6orf201Q7Z4U5 140 aa0.27□□□□□ -2.37
GTF3C3-209ENST00000466862 EDC4Q6P2E9 1401 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms