RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 CIRBPQ14011 172 aaKnown RBP7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 RETNQ9HD89 108 aa7.44□□□□□ -1.22
PDZRN3-204ENST00000466348 A0A087WZ39 114 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 TRAV8-3A0A0A6YYJ7 113 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 IGHV3OR16-9A0A0B4J2B5 98 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 A0A0J9YWU9 116 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 A0A1B0GWB2 263 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 K7EIL1 84 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 SPINK8P0C7L1 97 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 COPS9Q8WXC6 57 aa7.43□□□□□ -1.22
PDZRN3-204ENST00000466348 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 FXYD2P54710 66 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 RPL24P83731 157 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 DEFB121Q5J5C9 76 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 MDFIQ99750 246 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 PPDPFQ9H3Y8 114 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 COL6A5A8TX70 2615 aa7.42□□□□□ -1.22
PDZRN3-204ENST00000466348 MAST4O15021 2626 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 IFITM1P13164 125 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 Q6ZTC4 211 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 SPANXDQ9BXN6 97 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 SPANXCQ9NY87 97 aa7.41□□□□□ -1.22
PDZRN3-204ENST00000466348 DEFB131BA0A096LNP1 70 aa7.4□□□□□ -1.22
PDZRN3-204ENST00000466348 TRAV10A0A0B4J240 114 aa7.4□□□□□ -1.22
PDZRN3-204ENST00000466348 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.22
PDZRN3-204ENST00000466348 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
PDZRN3-204ENST00000466348 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
PDZRN3-204ENST00000466348 ANGP03950 147 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-204ENST00000466348 REG3AQ06141 175 aa7.39□□□□□ -1.23
PDZRN3-204ENST00000466348 CD164L2Q6UWJ8 174 aa7.39□□□□□ -1.23
PDZRN3-204ENST00000466348 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 UBE2V1Q13404 147 aa7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 VAMP3Q15836 100 aa7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 COX7B2Q8TF08 81 aa7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 ZNF625Q96I27 306 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 LITAFQ99732 161 aa7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 PRR34Q9NV39 138 aa7.38□□□□□ -1.23
PDZRN3-204ENST00000466348 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 IGKV3OR2-268A0A0C4DH90 116 aa7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 NANOS2P60321 138 aaKnown RBP7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 MIAQ16674 131 aa7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 LINC00269Q8N2A0 174 aa7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 Q9H8V8 135 aa7.37□□□□□ -1.23
PDZRN3-204ENST00000466348 A0A0B4J2C4 111 aa7.36□□□□□ -1.23
PDZRN3-204ENST00000466348 FABP2P12104 132 aa7.36□□□□□ -1.23
PDZRN3-204ENST00000466348 CXCL5P42830 114 aa7.36□□□□□ -1.23
PDZRN3-204ENST00000466348 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
PDZRN3-204ENST00000466348 Q8IZM0 81 aa7.36□□□□□ -1.23
PDZRN3-204ENST00000466348 B9D2Q9BPU9 175 aa7.36□□□□□ -1.23
PDZRN3-204ENST00000466348 IGLL5B9A064 214 aa7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 H3BUT2 72 aa7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 K7EP13 123 aa7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 COX7A2LO14548 114 aa7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 PRSS2P07478 247 aa7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 MUSTN1Q8IVN3 82 aa7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 CHCHD10Q8WYQ3 142 aaPredicted RBP7.35□□□□□ -1.23
PDZRN3-204ENST00000466348 A0A1W2PPM0 123 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 IBA57-AS1B1ANH7 110 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 APOMO95445 188 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 PRB2P02812 416 aaPredicted RBP7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 XCL1P47992 114 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 C6orf226Q5I0X4 101 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 LYRM7Q5U5X0 104 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 MRAPQ8TCY5 172 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 RAB37Q96AX2 223 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 PRO1854Q9UHT4 67 aa7.34□□□□□ -1.23
PDZRN3-204ENST00000466348 A4D1N5 150 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 GAGE10A6NGK3 116 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 CRPP02741 224 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 CFC1BP0CG36 223 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 CFC1P0CG37 223 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 ESRGQ1W209 222 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 LINC01556Q5JQF7 62 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 ADAMTSL4-AS1Q5T5F5 129 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 MUC7Q8TAX7 377 aa7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 KLK5Q9Y337 293 aaPredicted RBP7.33□□□□□ -1.24
PDZRN3-204ENST00000466348 MALP21145 153 aa7.32□□□□□ -1.24
PDZRN3-204ENST00000466348 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
PDZRN3-204ENST00000466348 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
PDZRN3-204ENST00000466348 K7EP34 96 aa7.31□□□□□ -1.24
PDZRN3-204ENST00000466348 K7ERJ3 54 aa7.31□□□□□ -1.24
PDZRN3-204ENST00000466348 FOXI1Q12951 378 aa7.31□□□□□ -1.24
PDZRN3-204ENST00000466348 COX17Q14061 63 aa7.31□□□□□ -1.24
PDZRN3-204ENST00000466348 ENHOQ6UWT2 76 aa7.31□□□□□ -1.24
PDZRN3-204ENST00000466348 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
PDZRN3-204ENST00000466348 DNAH10OSP0CZ25 163 aa7.3□□□□□ -1.24
PDZRN3-204ENST00000466348 CCL18P55774 89 aa7.3□□□□□ -1.24
PDZRN3-204ENST00000466348 CKS1BP61024 79 aa7.3□□□□□ -1.24
PDZRN3-204ENST00000466348 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
PDZRN3-204ENST00000466348 LINC00308Q8TCZ7 52 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms