RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 CORTO00230 105 aa-0.32□□□□□ -2.46
XRN1-205ENST00000465507 MGPP08493 103 aa-0.32□□□□□ -2.46
XRN1-205ENST00000465507 DEFB123Q8N688 67 aa-0.32□□□□□ -2.46
XRN1-205ENST00000465507 FAM167A-AS1Q96KT0 104 aa-0.32□□□□□ -2.46
XRN1-205ENST00000465507 PAPPAQ13219 1627 aa-0.32□□□□□ -2.46
XRN1-205ENST00000465507 SMG6Q86US8 1419 aaKnown RBP-0.32□□□□□ -2.46
XRN1-205ENST00000465507 SPTA1P02549 2419 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 SHROOM2Q13796 1616 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 SPRR1BP22528 89 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 GNG11P61952 73 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 C10orf113Q5VZT2 155 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 FAM223AQ8IWN6 122 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 UQCR10Q9UDW1 63 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 ARL2-SNX15V9GYD0 113 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 HMGXB3Q12766 1538 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 MYOM1P52179 1685 aa-0.33□□□□□ -2.46
XRN1-205ENST00000465507 CHD8Q9HCK8 2581 aa-0.34□□□□□ -2.46
XRN1-205ENST00000465507 MYOM2P54296 1465 aa-0.34□□□□□ -2.46
XRN1-205ENST00000465507 WNK1Q9H4A3 2382 aa-0.34□□□□□ -2.46
XRN1-205ENST00000465507 COX6B1P14854 86 aa-0.34□□□□□ -2.46
XRN1-205ENST00000465507 ATP5EP56381 51 aaPredicted RBP-0.34□□□□□ -2.46
XRN1-205ENST00000465507 URB1O60287 2271 aaKnown RBP-0.34□□□□□ -2.46
XRN1-205ENST00000465507 RAPGEF6Q8TEU7 1601 aa-0.35□□□□□ -2.46
XRN1-205ENST00000465507 ARHGEF5Q12774 1597 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 SCAPERQ9BY12 1400 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 F6UZH7 168 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 K7EQZ3 153 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 GNG4P50150 75 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 PPP3R1P63098 170 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 Q0VG73 95 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 WHAMMP3Q1A5X7 153 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 C2orf88Q9BSF0 95 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 NALCNQ8IZF0 1738 aa-0.35□□□□□ -2.47
XRN1-205ENST00000465507 ZANQ9Y493 2812 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 MUC2Q02817 5179 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 TENM2Q9NT68 2774 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 PRKDCP78527 4128 aaKnown RBP-0.36□□□□□ -2.47
XRN1-205ENST00000465507 ANKRD17O75179 2603 aaKnown RBP-0.36□□□□□ -2.47
XRN1-205ENST00000465507 LINC00587B1AMM8 73 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 UBE2D3P61077 147 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 UBE2D2P62837 147 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 UBA52P62987 128 aaKnown RBP-0.36□□□□□ -2.47
XRN1-205ENST00000465507 KRTAP6-1Q3LI64 71 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 MANBALQ9NQG1 85 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 FAIMQ9NVQ4 179 aa-0.36□□□□□ -2.47
XRN1-205ENST00000465507 POLA1P09884 1462 aaPredicted RBP-0.36□□□□□ -2.47
XRN1-205ENST00000465507 TULP4Q9NRJ4 1543 aa-0.37□□□□□ -2.47
XRN1-205ENST00000465507 LINC00959A0A1B0GUT2 108 aa-0.37□□□□□ -2.47
XRN1-205ENST00000465507 SARNPP82979 210 aaKnown RBP-0.37□□□□□ -2.47
XRN1-205ENST00000465507 SFTA2Q6UW10 78 aa-0.37□□□□□ -2.47
XRN1-205ENST00000465507 SVBPQ8N300 66 aa-0.37□□□□□ -2.47
XRN1-205ENST00000465507 WDR7Q9Y4E6 1490 aa-0.37□□□□□ -2.47
XRN1-205ENST00000465507 TET3O43151 1660 aa-0.37□□□□□ -2.47
XRN1-205ENST00000465507 EP300Q09472 2414 aaPredicted RBP-0.37□□□□□ -2.47
XRN1-205ENST00000465507 S100A1P23297 94 aa-0.38□□□□□ -2.47
XRN1-205ENST00000465507 SETXQ7Z333 2677 aaKnown RBP-0.38□□□□□ -2.47
XRN1-205ENST00000465507 BTAF1O14981 1849 aa-0.38□□□□□ -2.47
XRN1-205ENST00000465507 ARHGEF12Q9NZN5 1544 aa-0.38□□□□□ -2.47
XRN1-205ENST00000465507 KDM5AP29375 1690 aaKnown RBP-0.39□□□□□ -2.47
XRN1-205ENST00000465507 CUL7Q14999 1698 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 GAPVD1Q14C86 1478 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 MAGI1Q96QZ7 1491 aaPredicted RBP-0.39□□□□□ -2.47
XRN1-205ENST00000465507 TRBV7-4A0A0J9YYF1 115 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 LCN9Q8WX39 176 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 LINC01600Q96MT4 127 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 PRO1854Q9UHT4 67 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 GNG8Q9UK08 70 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 EHBP1L1Q8N3D4 1523 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 LRP1BQ9NZR2 4599 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 COL6A3P12111 3177 aa-0.39□□□□□ -2.47
XRN1-205ENST00000465507 NAP1L6A6NFF2 107 aa-0.4□□□□□ -2.47
XRN1-205ENST00000465507 FAM223BA6NKX1 122 aa-0.4□□□□□ -2.47
XRN1-205ENST00000465507 H3BQ15 152 aa-0.4□□□□□ -2.47
XRN1-205ENST00000465507 COX6CP09669 75 aa-0.4□□□□□ -2.47
XRN1-205ENST00000465507 TMEM203Q969S6 136 aa-0.4□□□□□ -2.47
XRN1-205ENST00000465507 ADGRL2O95490 1459 aa-0.41□□□□□ -2.47
XRN1-205ENST00000465507 TRAPPC2P0DI81 140 aa-0.41□□□□□ -2.48
XRN1-205ENST00000465507 TRAPPC2BP0DI82 140 aa-0.41□□□□□ -2.48
XRN1-205ENST00000465507 FDCSPQ8NFU4 85 aa-0.41□□□□□ -2.48
XRN1-205ENST00000465507 ACANP16112 2415 aa-0.41□□□□□ -2.48
XRN1-205ENST00000465507 DNAJC13O75165 2243 aa-0.41□□□□□ -2.48
XRN1-205ENST00000465507 PZPP20742 1482 aa-0.41□□□□□ -2.48
XRN1-205ENST00000465507 A0A1B0GWA3 101 aa-0.42□□□□□ -2.48
XRN1-205ENST00000465507 SNCAP37840 140 aa-0.42□□□□□ -2.48
XRN1-205ENST00000465507 MRPS10P82664 201 aaKnown RBP-0.43□□□□□ -2.48
XRN1-205ENST00000465507 C12orf57Q99622 126 aa-0.43□□□□□ -2.48
XRN1-205ENST00000465507 PRO1933Q9H354 126 aa-0.43□□□□□ -2.48
XRN1-205ENST00000465507 LINC00846Q9NV44 126 aa-0.43□□□□□ -2.48
XRN1-205ENST00000465507 C1orf167Q5SNV9 1468 aa-0.43□□□□□ -2.48
XRN1-205ENST00000465507 TSC2P49815 1807 aa-0.43□□□□□ -2.48
XRN1-205ENST00000465507 ARHGAP5Q13017 1502 aa-0.43□□□□□ -2.48
XRN1-205ENST00000465507 hADV29S1A0JD25 119 aa-0.44□□□□□ -2.48
XRN1-205ENST00000465507 CRYM-AS1A6NIL9 109 aa-0.44□□□□□ -2.48
XRN1-205ENST00000465507 SAA2P0DJI9 122 aaPredicted RBP-0.44□□□□□ -2.48
XRN1-205ENST00000465507 SPRR2BP35325 72 aa-0.44□□□□□ -2.48
XRN1-205ENST00000465507 HSD52Q0P140 79 aa-0.44□□□□□ -2.48
XRN1-205ENST00000465507 MRC2Q9UBG0 1479 aa-0.44□□□□□ -2.48
XRN1-205ENST00000465507 SRRM2Q9UQ35 2752 aaKnown RBP-0.44□□□□□ -2.48
XRN1-205ENST00000465507 MAPKBP1O60336 1514 aa-0.44□□□□□ -2.48
XRN1-205ENST00000465507 TMEM262E9PQX1 116 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms