RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 CSNK1G2-AS1Q8NCQ2 148 aa2.55□□□□□ -2
SP3-205ENST00000465379 LOC100996750A0A140TA64 210 aa2.55□□□□□ -2
SP3-205ENST00000465379 LUZP6Q538Z0 58 aa2.55□□□□□ -2
SP3-205ENST00000465379 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
SP3-205ENST00000465379 GREB1LQ9C091 1923 aaPredicted RBP2.55□□□□□ -2
SP3-205ENST00000465379 ST20-AS1Q8NBB2 130 aa2.55□□□□□ -2
SP3-205ENST00000465379 RALGAPA1Q6GYQ0 2036 aa2.55□□□□□ -2
SP3-205ENST00000465379 RPS29P62273 56 aaKnown RBP2.55□□□□□ -2
SP3-205ENST00000465379 Q8NAQ8 132 aa2.55□□□□□ -2
SP3-205ENST00000465379 MUC22E2RYF6 1773 aaPredicted RBP2.54□□□□□ -2
SP3-205ENST00000465379 SOSTDC1Q6X4U4 206 aa2.54□□□□□ -2
SP3-205ENST00000465379 FAM218AQ96MZ4 157 aa2.54□□□□□ -2
SP3-205ENST00000465379 GPHA2Q96T91 129 aa2.54□□□□□ -2
SP3-205ENST00000465379 YPEL4Q96NS1 127 aa2.54□□□□□ -2
SP3-205ENST00000465379 DENND4AQ7Z401 1863 aa2.54□□□□□ -2
SP3-205ENST00000465379 NCKAP5O14513 1909 aa2.54□□□□□ -2
SP3-205ENST00000465379 WDR81Q562E7 1941 aa2.54□□□□□ -2
SP3-205ENST00000465379 A0A087WSZ3 146 aa2.54□□□□□ -2
SP3-205ENST00000465379 PATE2Q6UY27 113 aa2.54□□□□□ -2
SP3-205ENST00000465379 MRPL34Q9BQ48 92 aaKnown RBP2.54□□□□□ -2
SP3-205ENST00000465379 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
SP3-205ENST00000465379 FAM167A-AS1Q96KT0 104 aa2.54□□□□□ -2
SP3-205ENST00000465379 KIAA1549LQ6ZVL6 1849 aa2.53□□□□□ -2
SP3-205ENST00000465379 PRR3P79522 188 aaKnown RBP2.53□□□□□ -2
SP3-205ENST00000465379 Q6ZRX8 168 aa2.53□□□□□ -2
SP3-205ENST00000465379 PRB4P10163 310 aaPredicted RBP2.53□□□□□ -2
SP3-205ENST00000465379 Q8N1X5 172 aa2.53□□□□□ -2
SP3-205ENST00000465379 C18orf32Q8TCD1 76 aa2.53□□□□□ -2
SP3-205ENST00000465379 EP400Q96L91 3159 aa2.53□□□□□ -2
SP3-205ENST00000465379 A0A087WYN8 130 aa2.53□□□□□ -2
SP3-205ENST00000465379 LINC01546A6NGU7 62 aa2.53□□□□□ -2
SP3-205ENST00000465379 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
SP3-205ENST00000465379 S4R3F8 94 aa2.53□□□□□ -2
SP3-205ENST00000465379 TRBV7-4A0A0J9YYF1 115 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 IGLV5-39A0A0G2JS06 123 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 URB1O60287 2271 aaKnown RBP2.52□□□□□ -2.01
SP3-205ENST00000465379 MPLKIPQ8TAP9 179 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 C14orf144Q96I85 54 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 PCDH15Q96QU1 1955 aa2.52□□□□□ -2.01
SP3-205ENST00000465379 UNQ6190/PRO20217Q6UXQ8 127 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 LRRK1Q38SD2 2015 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 CABIN1Q9Y6J0 2220 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 C1orf64Q8NEQ6 169 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 ABCA7Q8IZY2 2146 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 PHF5AQ7RTV0 110 aaKnown RBP2.51□□□□□ -2.01
SP3-205ENST00000465379 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
SP3-205ENST00000465379 Q9UF83 564 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 BAZ2BQ9UIF8 2168 aaKnown RBP2.5□□□□□ -2.01
SP3-205ENST00000465379 RETNLBQ9BQ08 111 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 ALPK3Q96L96 1907 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 ZFC3H1O60293 1989 aaKnown RBP2.5□□□□□ -2.01
SP3-205ENST00000465379 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 A0A1W2PPM0 123 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 SMR3BP02814 79 aaPredicted RBP2.5□□□□□ -2.01
SP3-205ENST00000465379 ELOF1P60002 83 aaKnown RBP2.5□□□□□ -2.01
SP3-205ENST00000465379 COL4A2P08572 1712 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 VWA8A3KMH1 1905 aa2.5□□□□□ -2.01
SP3-205ENST00000465379 PLXNA2O75051 1894 aa2.49□□□□□ -2.01
SP3-205ENST00000465379 C8orf17Q9NRJ1 99 aa2.49□□□□□ -2.01
SP3-205ENST00000465379 PLAC8Q9NZF1 115 aa2.49□□□□□ -2.01
SP3-205ENST00000465379 DOCK6Q96HP0 2047 aa2.49□□□□□ -2.01
SP3-205ENST00000465379 RPL39P62891 51 aaKnown RBP2.49□□□□□ -2.01
SP3-205ENST00000465379 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
SP3-205ENST00000465379 C15orf56Q8N910 161 aa2.49□□□□□ -2.01
SP3-205ENST00000465379 A0A1B0GVX0 72 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 CCDC179H3BU77 68 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 KRTAP10-11P60412 298 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 PRR9Q5T870 116 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 GDF5OSQ5U4N7 250 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 PRRC2BQ5JSZ5 2229 aaKnown RBP2.48□□□□□ -2.01
SP3-205ENST00000465379 ANAPC1Q9H1A4 1944 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 ESPL1Q14674 2120 aa2.48□□□□□ -2.01
SP3-205ENST00000465379 KIAA0100Q14667 2235 aaKnown RBP2.48□□□□□ -2.01
SP3-205ENST00000465379 NYNRINQ9P2P1 1898 aaKnown RBP2.48□□□□□ -2.01
SP3-205ENST00000465379 SCN3AQ9NY46 2000 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 IGLV5-45A0A087WSX0 123 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 SPRR4Q96PI1 79 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 AMELXQ99217 191 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.47□□□□□ -2.01
SP3-205ENST00000465379 IGFL1Q6UW32 110 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 NOTCH2NLQ7Z3S9 236 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 KMT2EQ8IZD2 1858 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 A0A1B0GV90 55 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 C9orf92A6NGG3 77 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 C1orf195Q5TG92 126 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 LCA10Q71F78 164 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 SMIM11BQ8TCY0 68 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 DOCK4Q8N1I0 1966 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 MCM3APO60318 1980 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 SHROOM3Q8TF72 1996 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 TANC2Q9HCD6 1990 aa2.47□□□□□ -2.01
SP3-205ENST00000465379 PTPRSQ13332 1948 aa2.46□□□□□ -2.01
SP3-205ENST00000465379 ARID1BQ8NFD5 2236 aaPredicted RBP2.46□□□□□ -2.01
SP3-205ENST00000465379 POLR2KP53803 58 aaKnown RBP2.46□□□□□ -2.02
SP3-205ENST00000465379 CYYR1Q96J86 154 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms