RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CYTL1Q9NRR1 136 aa5.25□□□□□ -1.57
APP-213ENST00000464867 C6orf48Q9UBA6 75 aa5.25□□□□□ -1.57
APP-213ENST00000464867 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
APP-213ENST00000464867 TNFSF18Q9UNG2 199 aa5.25□□□□□ -1.57
APP-213ENST00000464867 TRAV13-1A0A0B4J241 112 aa5.24□□□□□ -1.57
APP-213ENST00000464867 SDHAF1A6NFY7 115 aa5.24□□□□□ -1.57
APP-213ENST00000464867 F2Z2F3 143 aa5.24□□□□□ -1.57
APP-213ENST00000464867 LYRM1O43325 122 aa5.24□□□□□ -1.57
APP-213ENST00000464867 CTRLP40313 264 aa5.24□□□□□ -1.57
APP-213ENST00000464867 RPS20P60866 119 aaKnown RBP5.24□□□□□ -1.57
APP-213ENST00000464867 SMAGPQ0VAQ4 97 aa5.24□□□□□ -1.57
APP-213ENST00000464867 CST9LP1Q5W188 147 aa5.24□□□□□ -1.57
APP-213ENST00000464867 MRPL52Q86TS9 123 aaKnown RBP5.24□□□□□ -1.57
APP-213ENST00000464867 BAGE2Q86Y30 109 aa5.24□□□□□ -1.57
APP-213ENST00000464867 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
APP-213ENST00000464867 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
APP-213ENST00000464867 NDUFC2-KCTD14E9PQ53 114 aa5.23□□□□□ -1.57
APP-213ENST00000464867 UBE2AP49459 152 aa5.23□□□□□ -1.57
APP-213ENST00000464867 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
APP-213ENST00000464867 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
APP-213ENST00000464867 TEX261Q6UWH6 196 aa5.23□□□□□ -1.57
APP-213ENST00000464867 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
APP-213ENST00000464867 FAM210AQ96ND0 272 aa5.23□□□□□ -1.57
APP-213ENST00000464867 CTXND1A0A1B0GTU2 59 aa5.22□□□□□ -1.57
APP-213ENST00000464867 XKRY2A2RUG3 117 aa5.22□□□□□ -1.57
APP-213ENST00000464867 PAGE4O60829 102 aa5.22□□□□□ -1.57
APP-213ENST00000464867 MPC2O95563 127 aa5.22□□□□□ -1.57
APP-213ENST00000464867 IGLC6P0CF74 106 aa5.22□□□□□ -1.57
APP-213ENST00000464867 IL7P13232 177 aa5.22□□□□□ -1.57
APP-213ENST00000464867 FHITP49789 147 aa5.22□□□□□ -1.57
APP-213ENST00000464867 TWIST1Q15672 202 aa5.22□□□□□ -1.57
APP-213ENST00000464867 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
APP-213ENST00000464867 RPL39LQ96EH5 51 aaKnown RBP5.22□□□□□ -1.57
APP-213ENST00000464867 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.57
APP-213ENST00000464867 IGLV8-61A0A075B6I0 122 aa5.21□□□□□ -1.58
APP-213ENST00000464867 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
APP-213ENST00000464867 TRBV30A0A0K0K1B3 111 aa5.21□□□□□ -1.58
APP-213ENST00000464867 INMT-MINDY4F8WBC2 141 aa5.21□□□□□ -1.58
APP-213ENST00000464867 PACRGQ96M98 296 aaPredicted RBP5.21□□□□□ -1.58
APP-213ENST00000464867 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
APP-213ENST00000464867 C7orf77A4D0Y5 90 aa5.2□□□□□ -1.58
APP-213ENST00000464867 PLA2G10O15496 165 aa5.2□□□□□ -1.58
APP-213ENST00000464867 SMIM15Q7Z3B0 74 aa5.2□□□□□ -1.58
APP-213ENST00000464867 MRPL55Q7Z7F7 128 aaKnown RBP5.2□□□□□ -1.58
APP-213ENST00000464867 FAM240BA0A1B0GVZ2 78 aa5.19□□□□□ -1.58
APP-213ENST00000464867 CFC1P0CG37 223 aa5.19□□□□□ -1.58
APP-213ENST00000464867 DEFA1P59665 94 aa5.19□□□□□ -1.58
APP-213ENST00000464867 RNASE13Q5GAN3 156 aaKnown RBP5.19□□□□□ -1.58
APP-213ENST00000464867 LYZL1Q6UWQ5 148 aa5.19□□□□□ -1.58
APP-213ENST00000464867 CSDC2Q9Y534 153 aaKnown RBP5.19□□□□□ -1.58
APP-213ENST00000464867 USH2AO75445 5202 aa5.19□□□□□ -1.58
APP-213ENST00000464867 IFNA1P01562 189 aa5.18□□□□□ -1.58
APP-213ENST00000464867 ZNF726P1Q15940 193 aa5.18□□□□□ -1.58
APP-213ENST00000464867 MARVELD1Q9BSK0 173 aa5.18□□□□□ -1.58
APP-213ENST00000464867 ST20Q9HBF5 79 aa5.18□□□□□ -1.58
APP-213ENST00000464867 TMEM242Q9NWH2 141 aa5.18□□□□□ -1.58
APP-213ENST00000464867 TP73-AS1Q9UF72 201 aa5.18□□□□□ -1.58
APP-213ENST00000464867 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
APP-213ENST00000464867 H2BFSP57053 126 aa5.17□□□□□ -1.58
APP-213ENST00000464867 FAM19A2Q8N3H0 131 aa5.17□□□□□ -1.58
APP-213ENST00000464867 RAB19A4D1S5 217 aa5.16□□□□□ -1.58
APP-213ENST00000464867 MAP1LC3B2A6NCE7 125 aa5.16□□□□□ -1.58
APP-213ENST00000464867 ZNF727A8MUV8 499 aa5.16□□□□□ -1.58
APP-213ENST00000464867 PFDN1O60925 122 aa5.16□□□□□ -1.58
APP-213ENST00000464867 SPINK1P00995 79 aa5.16□□□□□ -1.58
APP-213ENST00000464867 FCER1GP30273 86 aa5.16□□□□□ -1.58
APP-213ENST00000464867 PCOTHQ58A44 107 aa5.16□□□□□ -1.58
APP-213ENST00000464867 KRTAP5-11Q6L8G4 156 aa5.16□□□□□ -1.58
APP-213ENST00000464867 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
APP-213ENST00000464867 TMEM18Q96B42 140 aa5.16□□□□□ -1.58
APP-213ENST00000464867 MAP1LC3BQ9GZQ8 125 aa5.16□□□□□ -1.58
APP-213ENST00000464867 TRBV6-5A0A0K0K1A5 114 aa5.15□□□□□ -1.59
APP-213ENST00000464867 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
APP-213ENST00000464867 UPK1BO75841 260 aa5.15□□□□□ -1.59
APP-213ENST00000464867 FOXA3P55318 350 aaPredicted RBP5.15□□□□□ -1.59
APP-213ENST00000464867 AKR1C8PQ5T2L2 129 aa5.15□□□□□ -1.59
APP-213ENST00000464867 TMUB2Q71RG4 321 aa5.15□□□□□ -1.59
APP-213ENST00000464867 C9orf62Q8N4C0 152 aa5.15□□□□□ -1.59
APP-213ENST00000464867 LINC00469Q8N7U9 141 aa5.15□□□□□ -1.59
APP-213ENST00000464867 XAGE1AQ9HD64 81 aa5.15□□□□□ -1.59
APP-213ENST00000464867 TGIF2-C20orf24A0A0A6YYL0 155 aa5.14□□□□□ -1.59
APP-213ENST00000464867 IGHV3OR16-9A0A0B4J2B5 98 aa5.14□□□□□ -1.59
APP-213ENST00000464867 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
APP-213ENST00000464867 KRTAP13-1Q8IUC0 172 aa5.14□□□□□ -1.59
APP-213ENST00000464867 LINC00167Q96N53 147 aa5.14□□□□□ -1.59
APP-213ENST00000464867 RNASE7Q9H1E1 156 aaKnown RBP5.14□□□□□ -1.59
APP-213ENST00000464867 LINC00846Q9NV44 126 aa5.14□□□□□ -1.59
APP-213ENST00000464867 SSNA1O43805 119 aa5.13□□□□□ -1.59
APP-213ENST00000464867 BORCS7-ASMTA0A0B4J1R7 106 aa5.12□□□□□ -1.59
APP-213ENST00000464867 TRBV27A0A0K0K1C4 114 aa5.12□□□□□ -1.59
APP-213ENST00000464867 RPL35P42766 123 aaKnown RBP5.12□□□□□ -1.59
APP-213ENST00000464867 CKS1BP61024 79 aa5.12□□□□□ -1.59
APP-213ENST00000464867 KIAA0087Q14695 138 aa5.12□□□□□ -1.59
APP-213ENST00000464867 Q6ZUT4 128 aa5.12□□□□□ -1.59
APP-213ENST00000464867 Q8NBF4 154 aa5.12□□□□□ -1.59
APP-213ENST00000464867 CNFNQ9BYD5 112 aa5.12□□□□□ -1.59
APP-213ENST00000464867 VCYO14598 125 aa5.11□□□□□ -1.59
APP-213ENST00000464867 PRSS2P07478 247 aa5.11□□□□□ -1.59
APP-213ENST00000464867 RPL32P62910 135 aaKnown RBP5.11□□□□□ -1.59
APP-213ENST00000464867 PNRC1Q12796 327 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms