RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FHL2Q14192 279 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 CDKN2A-AS1Q9UH64 79 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 FAM19A3Q7Z5A8 133 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 LITAFQ99732 161 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 TM2D3Q9BRN9 247 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 NDUFA12Q9UI09 145 aa10.17□□□□□ -0.78
COL5A1-205ENST00000464187 TMEM243Q9BU79 118 aa10.16□□□□□ -0.78
COL5A1-205ENST00000464187 LINC00242Q5T6M2 205 aa10.15□□□□□ -0.78
COL5A1-205ENST00000464187 C11orf68Q9H3H3 251 aaKnown RBP10.15□□□□□ -0.78
COL5A1-205ENST00000464187 TEX48A0A1B0GUV7 120 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 A4D1N5 150 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 HERVK_113P63121 156 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 ZFAND6Q6FIF0 208 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
COL5A1-205ENST00000464187 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 TMEM101Q96IK0 257 aa10.14□□□□□ -0.79
COL5A1-205ENST00000464187 A0A0J9YWU9 116 aa10.13□□□□□ -0.79
COL5A1-205ENST00000464187 H3BMG7 143 aa10.13□□□□□ -0.79
COL5A1-205ENST00000464187 UBE2L6O14933 153 aa10.13□□□□□ -0.79
COL5A1-205ENST00000464187 ATP5G1P05496 136 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 RPL24P83731 157 aaKnown RBP10.12□□□□□ -0.79
COL5A1-205ENST00000464187 SPANXDQ9BXN6 97 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
COL5A1-205ENST00000464187 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 RNF151Q2KHN1 245 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 ADAMTSL4-AS1Q5T5F5 129 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
COL5A1-205ENST00000464187 H7C423 109 aa10.11□□□□□ -0.79
COL5A1-205ENST00000464187 K7ERU9 68 aa10.11□□□□□ -0.79
COL5A1-205ENST00000464187 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
COL5A1-205ENST00000464187 PRO1854Q9UHT4 67 aa10.11□□□□□ -0.79
COL5A1-205ENST00000464187 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 NDUFA1O15239 70 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 PRO0461Q9UI25 63 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 TRBV6-8A0A0A6YYG3 113 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 F8W1H4 67 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 GAGE6Q13070 117 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 MIAQ16674 131 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
COL5A1-205ENST00000464187 IGHV3-33P01772 117 aa10.09□□□□□ -0.79
COL5A1-205ENST00000464187 WFDC2Q14508 124 aa10.09□□□□□ -0.79
COL5A1-205ENST00000464187 CBY1Q9Y3M2 126 aa10.09□□□□□ -0.79
COL5A1-205ENST00000464187 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
COL5A1-205ENST00000464187 F5H768 121 aa10.08□□□□□ -0.8
COL5A1-205ENST00000464187 TIMM17BO60830 172 aa10.08□□□□□ -0.8
COL5A1-205ENST00000464187 HTN3P15516 51 aa10.08□□□□□ -0.8
COL5A1-205ENST00000464187 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
COL5A1-205ENST00000464187 B9D2Q9BPU9 175 aa10.08□□□□□ -0.8
COL5A1-205ENST00000464187 PAX4O43316 350 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 GYPEP15421 78 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 LYRM7Q5U5X0 104 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 PSMB2P49721 201 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 Q6ZTC4 211 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
COL5A1-205ENST00000464187 IGLV4-60A0A075B6I1 120 aa10.06□□□□□ -0.8
COL5A1-205ENST00000464187 TRAV26-1A0A087WT03 109 aa10.06□□□□□ -0.8
COL5A1-205ENST00000464187 PRSS2P07478 247 aa10.06□□□□□ -0.8
COL5A1-205ENST00000464187 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
COL5A1-205ENST00000464187 Q9H8V8 135 aa10.06□□□□□ -0.8
COL5A1-205ENST00000464187 NANOS2P60321 138 aaKnown RBP10.05□□□□□ -0.8
COL5A1-205ENST00000464187 NPC2P61916 151 aa10.05□□□□□ -0.8
COL5A1-205ENST00000464187 TCL1BO95988 128 aa10.05□□□□□ -0.8
COL5A1-205ENST00000464187 VPS25Q9BRG1 176 aa10.05□□□□□ -0.8
COL5A1-205ENST00000464187 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
COL5A1-205ENST00000464187 H7C2G1 150 aa10.04□□□□□ -0.8
COL5A1-205ENST00000464187 DAND5Q8N907 189 aa10.04□□□□□ -0.8
COL5A1-205ENST00000464187 ATP6V0E2Q8NHE4 81 aa10.04□□□□□ -0.8
COL5A1-205ENST00000464187 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
COL5A1-205ENST00000464187 IFITM1P13164 125 aa10.03□□□□□ -0.8
COL5A1-205ENST00000464187 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
COL5A1-205ENST00000464187 SH2D6Q7Z4S9 175 aa10.03□□□□□ -0.8
COL5A1-205ENST00000464187 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
COL5A1-205ENST00000464187 A0A096LPF7 62 aa10.02□□□□□ -0.81
COL5A1-205ENST00000464187 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
COL5A1-205ENST00000464187 ETDBQ3ZM63 59 aa10.02□□□□□ -0.81
COL5A1-205ENST00000464187 MEGF8Q7Z7M0 2845 aa10.01□□□□□ -0.81
COL5A1-205ENST00000464187 SCGB1C2P0DMR2 95 aa10.01□□□□□ -0.81
COL5A1-205ENST00000464187 CIRBPQ14011 172 aaKnown RBP10.01□□□□□ -0.81
COL5A1-205ENST00000464187 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
COL5A1-205ENST00000464187 Q1RN00 199 aa10□□□□□ -0.81
COL5A1-205ENST00000464187 COL7A1Q02388 2944 aa10□□□□□ -0.81
COL5A1-205ENST00000464187 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
COL5A1-205ENST00000464187 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
COL5A1-205ENST00000464187 LINC00308Q8TCZ7 52 aa9.99□□□□□ -0.81
COL5A1-205ENST00000464187 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
COL5A1-205ENST00000464187 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 NHLRC4P0CG21 123 aaPredicted RBP9.98□□□□□ -0.81
COL5A1-205ENST00000464187 HERV-K104P63124 156 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 IGHV3OR16-9A0A0B4J2B5 98 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms