RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 F6UB75 175 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 IGHV4-59P01825 116 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 APOC4P55056 127 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 RHOHQ15669 191 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 MIAQ16674 131 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 NSUN5P1Q3KNT7 163 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 CLEC19AQ6UXS0 136 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 TMEM61Q8N0U2 210 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 FAM19A4Q96LR4 140 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 JPT2Q9H910 190 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 EDA2RQ9HAV5 297 aa6.34□□□□□ -1.39
SHQ1-203ENST00000463369 OVOL1O14753 267 aa6.34□□□□□ -1.4
SHQ1-203ENST00000463369 LY6EQ16553 131 aa6.34□□□□□ -1.4
SHQ1-203ENST00000463369 MOB4Q9Y3A3 225 aa6.34□□□□□ -1.4
SHQ1-203ENST00000463369 C5orf56Q8N8D9 126 aa6.33□□□□□ -1.4
SHQ1-203ENST00000463369 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
SHQ1-203ENST00000463369 MAP6D1Q9H9H5 199 aa6.33□□□□□ -1.4
SHQ1-203ENST00000463369 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 HIST1H4AP62805 103 aaKnown RBP6.32□□□□□ -1.4
SHQ1-203ENST00000463369 PIK3CD-AS1Q5SR53 167 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 C20orf203Q8NBC4 194 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 F8P00451 2351 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 TRAV41A0A0B4J266 112 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 IGHV1-58A0A0C4DH39 117 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 NDUFA12Q9UI09 145 aa6.32□□□□□ -1.4
SHQ1-203ENST00000463369 NSD1Q96L73 2696 aaPredicted RBP6.31□□□□□ -1.4
SHQ1-203ENST00000463369 INAFM1C9JVW0 142 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 ATOX1O00244 68 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 TRACP01848 142 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 RBMY1CP0DJD4 496 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 DEFB1P60022 68 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 NPC2P61916 151 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 BEAN1Q3B7T3 259 aa6.31□□□□□ -1.4
SHQ1-203ENST00000463369 MTORP42345 2549 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 TRBV7-1A0A0A6YYK4 115 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 hADV29S1A0JD25 119 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 M0QY20 66 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 MRPS36P82909 103 aaKnown RBP6.3□□□□□ -1.4
SHQ1-203ENST00000463369 ECSCRQ19T08 205 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 DPH3Q96FX2 82 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 SOCS3O14543 225 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 TIMM17BO60830 172 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 DAZ2Q13117 558 aaKnown RBP6.3□□□□□ -1.4
SHQ1-203ENST00000463369 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
SHQ1-203ENST00000463369 DAND5Q8N907 189 aa6.3□□□□□ -1.4
SHQ1-203ENST00000463369 DAZ1Q9NQZ3 744 aaKnown RBP6.3□□□□□ -1.4
SHQ1-203ENST00000463369 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
SHQ1-203ENST00000463369 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 COX7A2LO14548 114 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 IGHG2P01859 326 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 BLCAPP62952 87 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 VSIG2Q96IQ7 327 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 FN1P02751 2386 aaKnown RBP6.29□□□□□ -1.4
SHQ1-203ENST00000463369 NF1P21359 2839 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 DNAJC9-AS1A6NH13 148 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 ATP6V0E1O15342 81 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 TMEM258P61165 79 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 FAM74A4Q5TZK3 123 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 PYGO1Q9Y3Y4 419 aa6.29□□□□□ -1.4
SHQ1-203ENST00000463369 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
SHQ1-203ENST00000463369 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
SHQ1-203ENST00000463369 C22orf24Q9Y442 160 aa6.28□□□□□ -1.4
SHQ1-203ENST00000463369 KLLNB2CW77 178 aa6.27□□□□□ -1.41
SHQ1-203ENST00000463369 G3V318 75 aa6.27□□□□□ -1.41
SHQ1-203ENST00000463369 TRAV12-3A0A0B4J271 114 aa6.27□□□□□ -1.41
SHQ1-203ENST00000463369 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
SHQ1-203ENST00000463369 INAFM2P0DMQ5 153 aa6.27□□□□□ -1.41
SHQ1-203ENST00000463369 CD28P10747 220 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 FAM222AQ5U5X8 452 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 Q8N2B8 174 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 UPK3BQ9BT76 320 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 ZNF702PQ9H963 129 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 SERP2Q8N6R1 65 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 C9orf85Q96MD7 179 aa6.26□□□□□ -1.41
SHQ1-203ENST00000463369 UNQ9165/PRO28630Q6UXU0 137 aa6.25□□□□□ -1.41
SHQ1-203ENST00000463369 NACAE9PAV3 2078 aa6.25□□□□□ -1.41
SHQ1-203ENST00000463369 MAST4O15021 2626 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 IGHV3-16A0A0C4DH30 117 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 NDUFA1O15239 70 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 CIRBPQ14011 172 aaKnown RBP6.24□□□□□ -1.41
SHQ1-203ENST00000463369 Q5XG85 94 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 LINC00308Q8TCZ7 52 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 NIPBLQ6KC79 2804 aaeCLIP6.24□□□□□ -1.41
SHQ1-203ENST00000463369 H3BUA1 57 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 DSCR8Q96T75 97 aa6.24□□□□□ -1.41
SHQ1-203ENST00000463369 NDUFA4O00483 81 aa6.23□□□□□ -1.41
SHQ1-203ENST00000463369 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
SHQ1-203ENST00000463369 RNASE13Q5GAN3 156 aaKnown RBP6.23□□□□□ -1.41
SHQ1-203ENST00000463369 LOC100131303A0A0U1RQF7 123 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 HRCT1Q6UXD1 115 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 C16orf95Q9H693 158 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 IGKV3-7A0A075B6H7 116 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 FAM223BA6NKX1 122 aa6.22□□□□□ -1.41
SHQ1-203ENST00000463369 Q6JHZ5 121 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms