RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 WNK3Q9BYP7 1800 aa0.09□□□□□ -2.39
NDUFA4-202ENST00000463308 TRAV30A0A087WSZ9 112 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 TRBV7-4A0A0J9YYF1 115 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 LINC00959A0A1B0GUT2 108 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 CPSF4LA6NMK7 179 aaKnown RBP0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 H3BQ15 152 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 I3L2K1 104 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 LEPROTL1O95214 131 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 MPC2O95563 127 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 SAA2P0DJI9 122 aaPredicted RBP0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 COX6B1P14854 86 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 DEFB105AQ8NG35 78 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 NSD3Q9BZ95 1437 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 CELSR2Q9HCU4 2923 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 PXDNQ92626 1479 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 ASXL3Q9C0F0 2248 aa0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.4
NDUFA4-202ENST00000463308 LRRC37A2A6NM11 1700 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 UQCRHLA0A096LP55 91 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 D6R8Y8 96 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 H3BQF6 201 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 M0R143 59 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 NDUFC1O43677 76 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 LINC00032P0C843 101 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 COX8AP10176 69 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 Q5VSD8 79 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 HEPN1Q6WQI6 88 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 C6orf201Q7Z4U5 140 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 MUSTN1Q8IVN3 82 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 USMG5Q96IX5 58 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 SPRR4Q96PI1 79 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 TRGV9Q99603 122 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 DPY30Q9C005 99 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 Q9H521 79 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 CHD9Q3L8U1 2897 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 NHSL1Q5SYE7 1610 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 AHCTF1Q8WYP5 2266 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 NLRP1Q9C000 1473 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 WDR7Q9Y4E6 1490 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 BDP1A6H8Y1 2624 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 SBF2Q86WG5 1849 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 RIMS1Q86UR5 1692 aaKnown RBP0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 QRICH2Q9H0J4 1663 aa0.08□□□□□ -2.4
NDUFA4-202ENST00000463308 ABCA12Q86UK0 2595 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 EIF4G3O43432 1585 aaKnown RBP0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 TCHHQ07283 1943 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 NRKQ7Z2Y5 1582 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 IGF2RP11717 2491 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 KDM3BQ7LBC6 1761 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 ABCC5O15440 1437 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 TOP2BQ02880 1626 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 CC2D2AQ9P2K1 1620 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 H0Y9P7 68 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 I3L3M4 83 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 ATOX1O00244 68 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 SPINK4O60575 86 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 ARMS2P0C7Q2 107 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 ZNF720Q7Z2F6 126 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 PSENENQ9NZ42 101 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 C1orf167Q5SNV9 1468 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 HMGXB3Q12766 1538 aa0.07□□□□□ -2.4
NDUFA4-202ENST00000463308 CACNA1HO95180 2353 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 MUC12Q9UKN1 5478 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 BIVM-ERCC5R4GMW8 1640 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 CNTLNQ9NXG0 1405 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 TET3O43151 1660 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 PPRC1Q5VV67 1664 aaKnown RBP0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 ADGRL2O95490 1459 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 TRBV25-1A0A075B6N4 114 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 F8WEM9 126 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 DEFB112Q30KQ8 113 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 ETDBQ3ZM63 59 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 ACBD7Q8N6N7 88 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 SERP2Q8N6R1 65 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 MAPKBP1O60336 1514 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 EHBP1L1Q8N3D4 1523 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 ANKRD36BQ8N2N9 1353 aa0.06□□□□□ -2.4
NDUFA4-202ENST00000463308 LAMC1P11047 1609 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 PAPPAQ13219 1627 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 NCOA3Q9Y6Q9 1424 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 MAGI1Q96QZ7 1491 aaPredicted RBP0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 MLH3Q9UHC1 1453 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 SPTY2D1-AS1A0A0U1RR47 76 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 H7BZZ5 65 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 PKIAP61925 76 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 LINC00846Q9NV44 126 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 SETBP1Q9Y6X0 1596 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 F8P00451 2351 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 FSIP2Q5CZC0 6907 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 RAPGEF6Q8TEU7 1601 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 MACF1Q9UPN3 7388 aaKnown RBP0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 CELSR1Q9NYQ6 3014 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 SCN7AQ01118 1682 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 ZFYVE26Q68DK2 2539 aa0.05□□□□□ -2.4
NDUFA4-202ENST00000463308 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
NDUFA4-202ENST00000463308 KNDC1Q76NI1 1749 aa0.04□□□□□ -2.4
NDUFA4-202ENST00000463308 HRNRQ86YZ3 2850 aaPredicted RBP0.04□□□□□ -2.4
NDUFA4-202ENST00000463308 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
NDUFA4-202ENST00000463308 GAPVD1Q14C86 1478 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms