RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 UBE2D3P61077 147 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 UBE2D2P62837 147 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 Q5XG85 94 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 MIC13Q5XKP0 118 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 PHF5AQ7RTV0 110 aaKnown RBP1.64□□□□□ -2.15
USH2A-203ENST00000463147 ODF3Q96PU9 254 aa1.64□□□□□ -2.15
USH2A-203ENST00000463147 NXT2Q9NPJ8 142 aaKnown RBP1.64□□□□□ -2.15
USH2A-203ENST00000463147 DOCK11Q5JSL3 2073 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 MYOFQ9NZM1 2061 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 KIAA1549Q9HCM3 1950 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
USH2A-203ENST00000463147 FANCMQ8IYD8 2048 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 TRAV12-2A0A075B6T6 113 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 IGKV2D-26A0A0A0MRZ7 120 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 TRAV17A0A0B4J275 112 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 TRBV27A0A0K0K1C4 114 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 hADV29S1A0JD25 119 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 STATHP02808 62 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 PYYP10082 97 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 NPC2P61916 151 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 CCL8P80075 99 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 PIGYQ3MUY2 71 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 C2orf82Q6UX34 121 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 LINC00643Q86TS7 51 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 Q8N2B8 174 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 MYOZ3Q8TDC0 251 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 SPTSSAQ969W0 71 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 LINC01600Q96MT4 127 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 TRGV9Q99603 122 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 NABP2Q9BQ15 211 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 SERP1Q9Y6X1 66 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 RP1P56715 2156 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 BRWD1Q9NSI6 2320 aa1.63□□□□□ -2.15
USH2A-203ENST00000463147 DIDO1Q9BTC0 2240 aaKnown RBP1.63□□□□□ -2.15
USH2A-203ENST00000463147 SCN3AQ9NY46 2000 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 EXPH5Q8NEV8 1989 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.62□□□□□ -2.15
USH2A-203ENST00000463147 TRAV12-1A0A0B4J245 112 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 TRBV7-6A0A0J9YX20 115 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 TRBV6-5A0A0K0K1A5 114 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 A0A1B0GUT8 65 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 hDV103S1A0JD37 113 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 M0R135 149 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 IGLV3-1P01715 115 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 COX6CP09669 75 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 PLNP26678 52 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 IFI27P40305 119 aaPredicted RBP1.62□□□□□ -2.15
USH2A-203ENST00000463147 UBE2D1P51668 147 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 PCBD1P61457 104 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 MRPS36P82909 103 aaKnown RBP1.62□□□□□ -2.15
USH2A-203ENST00000463147 PDE6HQ13956 83 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 CIRBPQ14011 172 aaKnown RBP1.62□□□□□ -2.15
USH2A-203ENST00000463147 DEFB121Q5J5C9 76 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 C10orf55Q5SWW7 151 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 C1orf134Q5TEV5 83 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 SERP2Q8N6R1 65 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 Q8N814 137 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 DSCR8Q96T75 97 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 DPH3P1Q9H4G8 78 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 DYNLRB1Q9NP97 96 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 PRO1854Q9UHT4 67 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 TNS1Q9HBL0 1735 aaKnown RBP1.62□□□□□ -2.15
USH2A-203ENST00000463147 FREM1Q5H8C1 2179 aa1.62□□□□□ -2.15
USH2A-203ENST00000463147 OTOGLQ3ZCN5 2332 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 TEX49A0A1B0GTD5 131 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 ZNF815PA8K554 130 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 K7EMI3 77 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 CKS2P33552 79 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 EFNA4P52798 201 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 SFTA2Q6UW10 78 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 NDUFA11Q86Y39 141 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 C10orf105Q8TEF2 133 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 MED12LQ86YW9 2145 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 KIAA1549LQ6ZVL6 1849 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 CR1P17927 2039 aa1.61□□□□□ -2.15
USH2A-203ENST00000463147 NCOA6Q14686 2063 aaPredicted RBP1.6□□□□□ -2.15
USH2A-203ENST00000463147 EML5Q05BV3 1969 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 TRAV10A0A0B4J240 114 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 D6R8Y8 96 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 C5orf67F2Z3F1 127 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 F8VRH5 84 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 CCL16O15467 120 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 ERC2-IT1O76042 136 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 NDUFA3O95167 84 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 TCRAP04437 139 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 ARMS2P0C7Q2 107 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 ATP5EP56381 51 aaPredicted RBP1.6□□□□□ -2.15
USH2A-203ENST00000463147 SPINK9Q5DT21 86 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 C10orf113Q5VZT2 155 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 C5orf38Q86SI9 138 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 Q8N8P6 123 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 CLEC2BQ92478 149 aa1.6□□□□□ -2.15
USH2A-203ENST00000463147 MRPL35Q9NZE8 188 aaKnown RBP1.6□□□□□ -2.15
USH2A-203ENST00000463147 TNRC6BQ9UPQ9 1833 aaKnown RBP1.59□□□□□ -2.15
USH2A-203ENST00000463147 TRGV2A0A075B6R0 118 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 TRBV6-8A0A0A6YYG3 113 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 TRBV7-1A0A0A6YYK4 115 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 TRBV30A0A0K0K1B3 111 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.15
USH2A-203ENST00000463147 LINC01546A6NGU7 62 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms