RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 C10orf113Q5VZT2 155 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 FDCSPQ8NFU4 85 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 TRGV9Q99603 122 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 COL4A6Q14031 1691 aa0.69□□□□□ -2.3
GPNMB-205ENST00000463011 PLEKHH2Q8IVE3 1493 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 KDM3BQ7LBC6 1761 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 UQCRHP07919 91 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 PMCHL1Q16048 86 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 PSMG4Q5JS54 123 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 SPINK6Q6UWN8 80 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 SPCS1Q9Y6A9 102 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 ARHGEF12Q9NZN5 1544 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 AKAP12Q02952 1782 aa0.68□□□□□ -2.3
GPNMB-205ENST00000463011 LAMC1P11047 1609 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 ANKRD26Q9UPS8 1709 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 BTAF1O14981 1849 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 TRBV25-1A0A075B6N4 114 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 A0A087WVE0 104 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 LCN9Q8WX39 176 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 SMR3AQ99954 134 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 PRO1933Q9H354 126 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 RAPGEF2Q9Y4G8 1499 aa0.67□□□□□ -2.3
GPNMB-205ENST00000463011 TRBV6-1A0A0K0K1D8 114 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 TRBV7-7A0A0K0K1E9 115 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 C7orf77A4D0Y5 90 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 SYS1-DBNDD2H3BUS1 97 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 LINC01600Q96MT4 127 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 Q9H521 79 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 MEGF8Q7Z7M0 2845 aa0.66□□□□□ -2.3
GPNMB-205ENST00000463011 CADP27708 2225 aa0.65□□□□□ -2.3
GPNMB-205ENST00000463011 MYO7AQ13402 2215 aa0.65□□□□□ -2.3
GPNMB-205ENST00000463011 UQCRHLA0A096LP55 91 aa0.65□□□□□ -2.31
GPNMB-205ENST00000463011 TP53AIP1Q9HCN2 124 aa0.65□□□□□ -2.31
GPNMB-205ENST00000463011 C1orf167Q5SNV9 1468 aa0.65□□□□□ -2.31
GPNMB-205ENST00000463011 TROQ12816 1431 aaPredicted RBP0.64□□□□□ -2.31
GPNMB-205ENST00000463011 NAV3Q8IVL0 2385 aa0.64□□□□□ -2.31
GPNMB-205ENST00000463011 WNK3Q9BYP7 1800 aa0.64□□□□□ -2.31
GPNMB-205ENST00000463011 MARF1Q9Y4F3 1742 aaKnown RBP0.64□□□□□ -2.31
GPNMB-205ENST00000463011 TTC37Q6PGP7 1564 aa0.63□□□□□ -2.31
GPNMB-205ENST00000463011 BAZ1AQ9NRL2 1556 aaPredicted RBP0.63□□□□□ -2.31
GPNMB-205ENST00000463011 POLA1P09884 1462 aaPredicted RBP0.63□□□□□ -2.31
GPNMB-205ENST00000463011 NLRP1Q9C000 1473 aa0.63□□□□□ -2.31
GPNMB-205ENST00000463011 NRXN1Q9ULB1 1477 aa0.63□□□□□ -2.31
GPNMB-205ENST00000463011 I3L2K1 104 aa0.63□□□□□ -2.31
GPNMB-205ENST00000463011 LINC00846Q9NV44 126 aa0.63□□□□□ -2.31
GPNMB-205ENST00000463011 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
GPNMB-205ENST00000463011 TTC28Q96AY4 2481 aa0.62□□□□□ -2.31
GPNMB-205ENST00000463011 NUP188Q5SRE5 1749 aa0.62□□□□□ -2.31
GPNMB-205ENST00000463011 Q8IZM0 81 aa0.62□□□□□ -2.31
GPNMB-205ENST00000463011 PLXNB2O15031 1838 aa0.61□□□□□ -2.31
GPNMB-205ENST00000463011 FXYD6-FXYD2A0A087WZ82 144 aa0.61□□□□□ -2.31
GPNMB-205ENST00000463011 DEFB107AQ8IZN7 70 aa0.61□□□□□ -2.31
GPNMB-205ENST00000463011 V9GYS6 101 aa0.61□□□□□ -2.31
GPNMB-205ENST00000463011 ASXL3Q9C0F0 2248 aa0.61□□□□□ -2.31
GPNMB-205ENST00000463011 GYPAP02724 150 aa0.6□□□□□ -2.31
GPNMB-205ENST00000463011 PIGYQ3MUY2 71 aa0.6□□□□□ -2.31
GPNMB-205ENST00000463011 BIVM-ERCC5R4GMW8 1640 aa0.6□□□□□ -2.31
GPNMB-205ENST00000463011 CACNA1HO95180 2353 aa0.6□□□□□ -2.31
GPNMB-205ENST00000463011 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
GPNMB-205ENST00000463011 LINC00959A0A1B0GUT2 108 aa0.59□□□□□ -2.31
GPNMB-205ENST00000463011 H3BQF6 201 aa0.59□□□□□ -2.31
GPNMB-205ENST00000463011 ARMS2P0C7Q2 107 aa0.59□□□□□ -2.31
GPNMB-205ENST00000463011 ETDBQ3ZM63 59 aa0.59□□□□□ -2.31
GPNMB-205ENST00000463011 ZNF720Q7Z2F6 126 aa0.59□□□□□ -2.31
GPNMB-205ENST00000463011 C20orf78Q9BR46 151 aa0.59□□□□□ -2.31
GPNMB-205ENST00000463011 PAPPAQ13219 1627 aa0.59□□□□□ -2.32
GPNMB-205ENST00000463011 MON2Q7Z3U7 1717 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 TRBV7-4A0A0J9YYF1 115 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 F8WEM9 126 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 GNG2P59768 71 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 Q5BKY6 102 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 KRTAP5-10Q6L8G5 202 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 HIGD1BQ9P298 99 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 ABCC2Q92887 1545 aa0.58□□□□□ -2.32
GPNMB-205ENST00000463011 CLTCQ00610 1675 aaKnown RBP0.57□□□□□ -2.32
GPNMB-205ENST00000463011 FANCAO15360 1455 aa0.57□□□□□ -2.32
GPNMB-205ENST00000463011 H0Y9P7 68 aa0.57□□□□□ -2.32
GPNMB-205ENST00000463011 PSENENQ9NZ42 101 aa0.57□□□□□ -2.32
GPNMB-205ENST00000463011 XRN1Q8IZH2 1706 aaKnown RBP0.57□□□□□ -2.32
GPNMB-205ENST00000463011 EPRSP07814 1512 aaKnown RBP0.57□□□□□ -2.32
GPNMB-205ENST00000463011 TULP4Q9NRJ4 1543 aa0.57□□□□□ -2.32
GPNMB-205ENST00000463011 FRAS1Q86XX4 4008 aa0.56□□□□□ -2.32
GPNMB-205ENST00000463011 EDC4Q6P2E9 1401 aaKnown RBP0.56□□□□□ -2.32
GPNMB-205ENST00000463011 ATP10BO94823 1461 aa0.56□□□□□ -2.32
GPNMB-205ENST00000463011 A0A1B0GU69 56 aa0.56□□□□□ -2.32
GPNMB-205ENST00000463011 GNGT1P63211 74 aa0.56□□□□□ -2.32
GPNMB-205ENST00000463011 C6orf201Q7Z4U5 140 aa0.56□□□□□ -2.32
GPNMB-205ENST00000463011 PDCD11Q14690 1871 aaKnown RBP0.56□□□□□ -2.32
GPNMB-205ENST00000463011 KNDC1Q76NI1 1749 aa0.55□□□□□ -2.32
GPNMB-205ENST00000463011 FAM208BQ5VWN6 2430 aa0.55□□□□□ -2.32
GPNMB-205ENST00000463011 CFDP00746 253 aaPredicted RBP0.55□□□□□ -2.32
GPNMB-205ENST00000463011 SPINK1P00995 79 aa0.55□□□□□ -2.32
GPNMB-205ENST00000463011 LEPROTL1O95214 131 aa0.54□□□□□ -2.32
GPNMB-205ENST00000463011 WFDC2Q14508 124 aa0.54□□□□□ -2.32
GPNMB-205ENST00000463011 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
GPNMB-205ENST00000463011 CEP162Q5TB80 1403 aa0.54□□□□□ -2.32
GPNMB-205ENST00000463011 MYO7BQ6PIF6 2116 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms