RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 GEMIN7Q9H840 131 aaKnown RBP8.87□□□□□ -0.99
COL4A6-204ENST00000461897 H3BT86 120 aa8.86□□□□□ -0.99
COL4A6-204ENST00000461897 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
COL4A6-204ENST00000461897 CSDC2Q9Y534 153 aaKnown RBP8.86□□□□□ -0.99
COL4A6-204ENST00000461897 MAST4O15021 2626 aa8.85□□□□□ -0.99
COL4A6-204ENST00000461897 PRSS2P07478 247 aa8.85□□□□□ -0.99
COL4A6-204ENST00000461897 NTN5Q8WTR8 489 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-204ENST00000461897 CDKN2A-AS1Q9UH64 79 aa8.85□□□□□ -0.99
COL4A6-204ENST00000461897 COX6CP09669 75 aa8.85□□□□□ -0.99
COL4A6-204ENST00000461897 TMEM101Q96IK0 257 aa8.85□□□□□ -0.99
COL4A6-204ENST00000461897 PPDPFQ9H3Y8 114 aa8.85□□□□□ -0.99
COL4A6-204ENST00000461897 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
COL4A6-204ENST00000461897 A8MZ25 164 aa8.84□□□□□ -0.99
COL4A6-204ENST00000461897 LST1O00453 97 aa8.84□□□□□ -0.99
COL4A6-204ENST00000461897 WIPF1O43516 503 aa8.84□□□□□ -0.99
COL4A6-204ENST00000461897 HERVK_113P63121 156 aa8.84□□□□□ -0.99
COL4A6-204ENST00000461897 STAB1Q9NY15 2570 aa8.83□□□□□ -1
COL4A6-204ENST00000461897 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
COL4A6-204ENST00000461897 H7C423 109 aa8.83□□□□□ -1
COL4A6-204ENST00000461897 DEFB121Q5J5C9 76 aa8.83□□□□□ -1
COL4A6-204ENST00000461897 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
COL4A6-204ENST00000461897 UBE2WQ96B02 151 aa8.82□□□□□ -1
COL4A6-204ENST00000461897 ANK2Q01484 3957 aa8.82□□□□□ -1
COL4A6-204ENST00000461897 PLAC8L1A1L4L8 177 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
COL4A6-204ENST00000461897 Q6Q795 121 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 C2orf82Q6UX34 121 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 C3orf56Q8N813 242 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 COX6A2Q02221 97 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 DAZ2Q13117 558 aaKnown RBP8.81□□□□□ -1
COL4A6-204ENST00000461897 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 DAZ4Q86SG3 579 aaKnown RBP8.81□□□□□ -1
COL4A6-204ENST00000461897 COPS9Q8WXC6 57 aa8.81□□□□□ -1
COL4A6-204ENST00000461897 DAZ3Q9NR90 486 aaKnown RBP8.81□□□□□ -1
COL4A6-204ENST00000461897 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
COL4A6-204ENST00000461897 FAM240AA0A1B0GVK7 77 aa8.8□□□□□ -1
COL4A6-204ENST00000461897 LINC00308Q8TCZ7 52 aa8.8□□□□□ -1
COL4A6-204ENST00000461897 C16orf74Q96GX8 76 aa8.8□□□□□ -1
COL4A6-204ENST00000461897 DNAH3Q8TD57 4116 aa8.8□□□□□ -1
COL4A6-204ENST00000461897 PKD1L1Q8TDX9 2849 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 K7EQD1 137 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
COL4A6-204ENST00000461897 MRPL23Q16540 153 aaKnown RBP8.79□□□□□ -1
COL4A6-204ENST00000461897 SHISA2Q6UWI4 295 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
COL4A6-204ENST00000461897 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
COL4A6-204ENST00000461897 TRGV1A0A0A0MS02 117 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 NTM-AS1Q6ZSK4 140 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 Q6ZTI0 123 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 Q9H8V8 135 aa8.79□□□□□ -1
COL4A6-204ENST00000461897 F5H768 121 aa8.78□□□□□ -1
COL4A6-204ENST00000461897 LINC00694P0DN24 101 aa8.78□□□□□ -1
COL4A6-204ENST00000461897 NOP10Q9NPE3 64 aaKnown RBP8.78□□□□□ -1
COL4A6-204ENST00000461897 NPC2P61916 151 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 OXLD1Q5BKU9 147 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 CLEC2BQ92478 149 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 CDC42SE2Q9NRR3 84 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 TRAV26-1A0A087WT03 109 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 SNCGO76070 127 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 HERV-K104P63124 156 aa8.77□□□□□ -1.01
COL4A6-204ENST00000461897 COL6A5A8TX70 2615 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 COX7A2LO14548 114 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE2EQ4V326 116 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 DAND5Q8N907 189 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE2DQ9UEU5 116 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 X6R8D5 127 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 NBEAL2Q6ZNJ1 2754 aa8.76□□□□□ -1.01
COL4A6-204ENST00000461897 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
COL4A6-204ENST00000461897 KIR2DL5BQ8NHK3 375 aa8.75□□□□□ -1.01
COL4A6-204ENST00000461897 OVOL2Q9BRP0 275 aa8.75□□□□□ -1.01
COL4A6-204ENST00000461897 KRTAP10-11P60412 298 aa8.74□□□□□ -1.01
COL4A6-204ENST00000461897 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE7O76087 117 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 NHLRC4P0CG21 123 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE12FP0CL80 117 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE12GP0CL81 117 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE12IP0CL82 117 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 APOC4P55056 127 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
COL4A6-204ENST00000461897 TRACP01848 142 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 EGFEM1PQ0D2K5 195 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 TRBV6-4A0A1B0GX49 114 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
COL4A6-204ENST00000461897 FAM222AQ5U5X8 452 aa8.72□□□□□ -1.01
COL4A6-204ENST00000461897 TRGV2A0A075B6R0 118 aa8.71□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE12JA6NER3 117 aa8.71□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE4Q13068 117 aa8.71□□□□□ -1.01
COL4A6-204ENST00000461897 GAGE5Q13069 117 aa8.71□□□□□ -1.01
COL4A6-204ENST00000461897 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
COL4A6-204ENST00000461897 ACYP1P07311 99 aa8.7□□□□□ -1.02
COL4A6-204ENST00000461897 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
COL4A6-204ENST00000461897 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms