RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CCL8P80075 99 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 SPATA45Q537H7 98 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 LINC00299Q6ZSB3 139 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 DEFB123Q8N688 67 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 LINC00208Q96KT6 92 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 PTPRFP10586 1907 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 DDX60LQ5H9U9 1706 aaKnown RBP0.81□□□□□ -2.28
HDAC6-212ENST00000461608 ARAP2Q8WZ64 1704 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 NCOR1O75376 2440 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 PLXNA1Q9UIW2 1896 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 TRBV7-3A0A075B6L6 115 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 A0A0G2JND7 137 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 CLPSL1A2RUU4 121 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 CHKB-CPT1BH3BT56 60 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 APOC3P02656 99 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 SSBP1Q04837 148 aaKnown RBP0.8□□□□□ -2.28
HDAC6-212ENST00000461608 Q0VG73 95 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 FXYD3Q14802 87 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 ZNF56Q15929 161 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 Q86TA4 180 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 C20orf78Q9BR46 151 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 CYP4F30PQ9H0H9 118 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 BET1LQ9NYM9 111 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 MKI67P46013 3256 aaKnown RBP0.8□□□□□ -2.28
HDAC6-212ENST00000461608 A0A1B0GUL6 1792 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 PLXNB2O15031 1838 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 PHIPQ8WWQ0 1821 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 ZNF236Q9UL36 1845 aa0.8□□□□□ -2.28
HDAC6-212ENST00000461608 EML5Q05BV3 1969 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 SZT2Q5T011 3432 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 MUC4Q99102 2169 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 COL6A3P12111 3177 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 LRRC37A2A6NM11 1700 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 MUC22E2RYF6 1773 aaPredicted RBP0.79□□□□□ -2.28
HDAC6-212ENST00000461608 NBDYA0A0U1RRE5 68 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 A0A1W2PPM0 123 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 NAP1L6A6NFF2 107 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 H3BQF6 201 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 FXYD1O00168 92 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 PPP1R17O96001 155 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 NMBP08949 121 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 TRAPPC2P0DI81 140 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 TRAPPC2BP0DI82 140 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 ELOF1P60002 83 aaKnown RBP0.79□□□□□ -2.28
HDAC6-212ENST00000461608 KRTDAPP60985 99 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 PEA15Q15121 130 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 TDRG1Q3Y452 100 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 ZNF818PQ6ZRF7 136 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 NDUFA11Q86Y39 141 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 C5orf56Q8N8D9 126 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 COX7B2Q8TF08 81 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 BPESC1Q9GZL8 116 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 DOCK2Q92608 1830 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 DOCK1Q14185 1865 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 MYLKQ15746 1914 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 MYO18AQ92614 2054 aaKnown RBP0.79□□□□□ -2.28
HDAC6-212ENST00000461608 HEATR1Q9H583 2144 aaKnown RBP0.79□□□□□ -2.28
HDAC6-212ENST00000461608 BRCA2P51587 3418 aa0.79□□□□□ -2.28
HDAC6-212ENST00000461608 LOC285556D6RIA3 1793 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 CENPFP49454 3210 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 MCM3APO60318 1980 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 TRBV7-1A0A0A6YYK4 115 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 TRAV22A0A0B4J277 110 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 K7EP34 96 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 ATOX1O00244 68 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 SFT2D2O95562 160 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 CYB5AP00167 134 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 CCL3L1P16619 93 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 ASIPP42127 132 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 EDDM3BP56851 147 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 SPAG11BQ08648 103 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 Q5VV11 94 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 SPAG11AQ6PDA7 123 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
HDAC6-212ENST00000461608 NXT2Q9NPJ8 142 aaKnown RBP0.78□□□□□ -2.28
HDAC6-212ENST00000461608 TENM1Q9UKZ4 2725 aa0.78□□□□□ -2.29
HDAC6-212ENST00000461608 A0A0G2JMZ2 1700 aa0.78□□□□□ -2.29
HDAC6-212ENST00000461608 SIP14410 1827 aa0.78□□□□□ -2.29
HDAC6-212ENST00000461608 ANK1P16157 1881 aa0.78□□□□□ -2.29
HDAC6-212ENST00000461608 PLXNA4Q9HCM2 1894 aa0.78□□□□□ -2.29
HDAC6-212ENST00000461608 MYH8P13535 1937 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 UNC13CQ8NB66 2214 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 TTC28Q96AY4 2481 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 PIEZO1Q92508 2521 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 HTTP42858 3142 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 C10orf142B7Z368 130 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 GYPAP02724 150 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 EFNA4P52798 201 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 XAF1Q6GPH4 301 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 ALKAL2Q6UX46 152 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 SERP2Q8N6R1 65 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 S100A16Q96FQ6 103 aaKnown RBP0.77□□□□□ -2.29
HDAC6-212ENST00000461608 CCL19Q99731 98 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 MGST2Q99735 147 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 NDUFA4L2Q9NRX3 87 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 CACFD1Q9UGQ2 172 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 V9GYV3 84 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 PARP14Q460N5 1801 aa0.77□□□□□ -2.29
HDAC6-212ENST00000461608 MYH9P35579 1960 aaKnown RBP0.77□□□□□ -2.29
HDAC6-212ENST00000461608 CITO14578 2027 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms