RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 Q8NAQ8 132 aa9.72□□□□□ -0.85
PTPRN-210ENST00000460801 DEFB4AO15263 64 aa9.72□□□□□ -0.85
PTPRN-210ENST00000460801 MIFP14174 115 aa9.72□□□□□ -0.85
PTPRN-210ENST00000460801 MIAQ16674 131 aa9.72□□□□□ -0.85
PTPRN-210ENST00000460801 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.71□□□□□ -0.85
PTPRN-210ENST00000460801 H3BMG7 143 aa9.71□□□□□ -0.85
PTPRN-210ENST00000460801 RNF183Q96D59 192 aa9.71□□□□□ -0.85
PTPRN-210ENST00000460801 PRSS2P07478 247 aa9.71□□□□□ -0.86
PTPRN-210ENST00000460801 PAX4O43316 350 aa9.7□□□□□ -0.86
PTPRN-210ENST00000460801 Q9H8V8 135 aa9.7□□□□□ -0.86
PTPRN-210ENST00000460801 F8W1H4 67 aa9.7□□□□□ -0.86
PTPRN-210ENST00000460801 IGHV3-33P01772 117 aa9.7□□□□□ -0.86
PTPRN-210ENST00000460801 RBX1P62877 108 aa9.7□□□□□ -0.86
PTPRN-210ENST00000460801 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
PTPRN-210ENST00000460801 LOC107984156A0A0G2JMH3 177 aa9.69□□□□□ -0.86
PTPRN-210ENST00000460801 DAD1P61803 113 aa9.69□□□□□ -0.86
PTPRN-210ENST00000460801 ARL17AQ8IVW1 177 aa9.69□□□□□ -0.86
PTPRN-210ENST00000460801 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
PTPRN-210ENST00000460801 SFTA2Q6UW10 78 aa9.68□□□□□ -0.86
PTPRN-210ENST00000460801 CELA1Q9UNI1 258 aa9.68□□□□□ -0.86
PTPRN-210ENST00000460801 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
PTPRN-210ENST00000460801 IFITM1P13164 125 aa9.68□□□□□ -0.86
PTPRN-210ENST00000460801 LYRM7Q5U5X0 104 aa9.68□□□□□ -0.86
PTPRN-210ENST00000460801 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
PTPRN-210ENST00000460801 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
PTPRN-210ENST00000460801 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
PTPRN-210ENST00000460801 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
PTPRN-210ENST00000460801 K7ERU9 68 aa9.67□□□□□ -0.86
PTPRN-210ENST00000460801 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
PTPRN-210ENST00000460801 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
PTPRN-210ENST00000460801 ATP5G1P05496 136 aa9.66□□□□□ -0.86
PTPRN-210ENST00000460801 SPART-AS1P0CW21 52 aa9.66□□□□□ -0.86
PTPRN-210ENST00000460801 WFDC2Q14508 124 aa9.66□□□□□ -0.86
PTPRN-210ENST00000460801 A0A096LPF7 62 aa9.66□□□□□ -0.86
PTPRN-210ENST00000460801 HERV-K104P63124 156 aa9.66□□□□□ -0.86
PTPRN-210ENST00000460801 LINC00959A0A1B0GUT2 108 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 PSMB2P49721 201 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 KRTAP10-11P60412 298 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 NPC2P61916 151 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 PRIMA1Q86XR5 153 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 DAND5Q8N907 189 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 BAHCC1Q9P281 2608 aa9.65□□□□□ -0.86
PTPRN-210ENST00000460801 TRBV20-1A0A075B6N2 111 aa9.64□□□□□ -0.87
PTPRN-210ENST00000460801 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
PTPRN-210ENST00000460801 TRAV26-1A0A087WT03 109 aa9.64□□□□□ -0.87
PTPRN-210ENST00000460801 A0A087WZ39 114 aa9.64□□□□□ -0.87
PTPRN-210ENST00000460801 TCL1BO95988 128 aa9.64□□□□□ -0.87
PTPRN-210ENST00000460801 STAB1Q9NY15 2570 aa9.63□□□□□ -0.87
PTPRN-210ENST00000460801 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
PTPRN-210ENST00000460801 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
PTPRN-210ENST00000460801 EGFEM1PQ0D2K5 195 aa9.63□□□□□ -0.87
PTPRN-210ENST00000460801 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
PTPRN-210ENST00000460801 G3V4G9 280 aa9.62□□□□□ -0.87
PTPRN-210ENST00000460801 H7C2G1 150 aa9.62□□□□□ -0.87
PTPRN-210ENST00000460801 SCGB1C2P0DMR2 95 aa9.62□□□□□ -0.87
PTPRN-210ENST00000460801 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
PTPRN-210ENST00000460801 MTURNQ8N3F0 131 aa9.62□□□□□ -0.87
PTPRN-210ENST00000460801 FBN1P35555 2871 aaKnown RBP9.62□□□□□ -0.87
PTPRN-210ENST00000460801 SHISA2Q6UWI4 295 aa9.62□□□□□ -0.87
PTPRN-210ENST00000460801 TRBV30A0A0K0K1B3 111 aa9.61□□□□□ -0.87
PTPRN-210ENST00000460801 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
PTPRN-210ENST00000460801 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
PTPRN-210ENST00000460801 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
PTPRN-210ENST00000460801 SS18Q15532 418 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
PTPRN-210ENST00000460801 Q1RN00 199 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 CBY1Q9Y3M2 126 aa9.6□□□□□ -0.87
PTPRN-210ENST00000460801 ETDBQ3ZM63 59 aa9.59□□□□□ -0.87
PTPRN-210ENST00000460801 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
PTPRN-210ENST00000460801 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
PTPRN-210ENST00000460801 HTN3P15516 51 aa9.59□□□□□ -0.87
PTPRN-210ENST00000460801 TRIAP1O43715 76 aa9.58□□□□□ -0.88
PTPRN-210ENST00000460801 PKD1L1Q8TDX9 2849 aa9.58□□□□□ -0.88
PTPRN-210ENST00000460801 XCL1P47992 114 aa9.58□□□□□ -0.88
PTPRN-210ENST00000460801 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
PTPRN-210ENST00000460801 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
PTPRN-210ENST00000460801 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
PTPRN-210ENST00000460801 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
PTPRN-210ENST00000460801 CMYA5Q8N3K9 4069 aa9.57□□□□□ -0.88
PTPRN-210ENST00000460801 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
PTPRN-210ENST00000460801 MAST4O15021 2626 aa9.56□□□□□ -0.88
PTPRN-210ENST00000460801 RPL13AP40429 203 aaKnown RBP9.56□□□□□ -0.88
PTPRN-210ENST00000460801 LELP1Q5T871 98 aa9.56□□□□□ -0.88
PTPRN-210ENST00000460801 RETNQ9HD89 108 aa9.56□□□□□ -0.88
PTPRN-210ENST00000460801 Q8N3U1 123 aa9.55□□□□□ -0.88
PTPRN-210ENST00000460801 ANGP03950 147 aaKnown RBP9.55□□□□□ -0.88
PTPRN-210ENST00000460801 CD164L2Q6UWJ8 174 aa9.54□□□□□ -0.88
PTPRN-210ENST00000460801 IBA57-AS1B1ANH7 110 aa9.54□□□□□ -0.88
PTPRN-210ENST00000460801 REG3AQ06141 175 aa9.54□□□□□ -0.88
PTPRN-210ENST00000460801 ATXN8Q156A1 80 aa9.54□□□□□ -0.88
PTPRN-210ENST00000460801 Q8IZM0 81 aa9.54□□□□□ -0.88
PTPRN-210ENST00000460801 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
PTPRN-210ENST00000460801 COX6CP09669 75 aa9.53□□□□□ -0.88
PTPRN-210ENST00000460801 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
PTPRN-210ENST00000460801 CYSRT1A8MQ03 144 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms