RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
NELFCD-201ENST00000460601 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 IGHV3-30-3P0DP02 117 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 LINC00242Q5T6M2 205 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 NFE4Q86UQ8 179 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
NELFCD-201ENST00000460601 ZNF22P17026 224 aaPredicted RBP11.48□□□□□ -0.57
NELFCD-201ENST00000460601 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
NELFCD-201ENST00000460601 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
NELFCD-201ENST00000460601 NMUP48645 174 aa11.47□□□□□ -0.57
NELFCD-201ENST00000460601 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
NELFCD-201ENST00000460601 TIRAPP58753 221 aa11.47□□□□□ -0.57
NELFCD-201ENST00000460601 GTF2H5Q6ZYL4 71 aa11.47□□□□□ -0.57
NELFCD-201ENST00000460601 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
NELFCD-201ENST00000460601 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
NELFCD-201ENST00000460601 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
NELFCD-201ENST00000460601 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
NELFCD-201ENST00000460601 CDKN2A-AS1Q9UH64 79 aa11.45□□□□□ -0.58
NELFCD-201ENST00000460601 H3BRM9 83 aa11.45□□□□□ -0.58
NELFCD-201ENST00000460601 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
NELFCD-201ENST00000460601 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
NELFCD-201ENST00000460601 GEMIN7Q9H840 131 aaKnown RBP11.44□□□□□ -0.58
NELFCD-201ENST00000460601 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
NELFCD-201ENST00000460601 LINC00959A0A1B0GUT2 108 aa11.44□□□□□ -0.58
NELFCD-201ENST00000460601 A6NDN8 102 aa11.44□□□□□ -0.58
NELFCD-201ENST00000460601 DYNC2H1Q8NCM8 4307 aaKnown RBP11.43□□□□□ -0.58
NELFCD-201ENST00000460601 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
NELFCD-201ENST00000460601 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
NELFCD-201ENST00000460601 REG3AQ06141 175 aa11.43□□□□□ -0.58
NELFCD-201ENST00000460601 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
NELFCD-201ENST00000460601 TMEM223A0PJW6 202 aa11.42□□□□□ -0.58
NELFCD-201ENST00000460601 SIVA1O15304 175 aa11.42□□□□□ -0.58
NELFCD-201ENST00000460601 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
NELFCD-201ENST00000460601 XCL1P47992 114 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 TMEM238C9JI98 176 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 CCL18P55774 89 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 HERVK_113P63121 156 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 FAM19A3Q7Z5A8 133 aa11.41□□□□□ -0.58
NELFCD-201ENST00000460601 E9PLD3 99 aa11.4□□□□□ -0.58
NELFCD-201ENST00000460601 K7EP34 96 aa11.4□□□□□ -0.58
NELFCD-201ENST00000460601 HSD52Q0P140 79 aa11.4□□□□□ -0.58
NELFCD-201ENST00000460601 BOD1L2Q8IYS8 172 aa11.4□□□□□ -0.58
NELFCD-201ENST00000460601 IGLV5-45A0A087WSX0 123 aa11.39□□□□□ -0.59
NELFCD-201ENST00000460601 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
NELFCD-201ENST00000460601 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
NELFCD-201ENST00000460601 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
NELFCD-201ENST00000460601 UBE2WQ96B02 151 aa11.38□□□□□ -0.59
NELFCD-201ENST00000460601 PRR34Q9NV39 138 aa11.38□□□□□ -0.59
NELFCD-201ENST00000460601 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
NELFCD-201ENST00000460601 HERVK_113P61574 105 aa11.37□□□□□ -0.59
NELFCD-201ENST00000460601 LINC01556Q5JQF7 62 aa11.37□□□□□ -0.59
NELFCD-201ENST00000460601 C5orf38Q86SI9 138 aa11.37□□□□□ -0.59
NELFCD-201ENST00000460601 DNAH1Q9P2D7 4330 aa11.37□□□□□ -0.59
NELFCD-201ENST00000460601 SS18Q15532 418 aa11.36□□□□□ -0.59
NELFCD-201ENST00000460601 CHCHD10Q8WYQ3 142 aaPredicted RBP11.36□□□□□ -0.59
NELFCD-201ENST00000460601 SMIM1B2RUZ4 78 aa11.36□□□□□ -0.59
NELFCD-201ENST00000460601 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
NELFCD-201ENST00000460601 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
NELFCD-201ENST00000460601 H3BUT2 72 aa11.35□□□□□ -0.59
NELFCD-201ENST00000460601 J3QQQ9 107 aa11.35□□□□□ -0.59
NELFCD-201ENST00000460601 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
NELFCD-201ENST00000460601 CRPP02741 224 aa11.34□□□□□ -0.59
NELFCD-201ENST00000460601 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
NELFCD-201ENST00000460601 Q9H8V8 135 aa11.33□□□□□ -0.6
NELFCD-201ENST00000460601 LEPROTO15243 131 aa11.33□□□□□ -0.6
NELFCD-201ENST00000460601 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
NELFCD-201ENST00000460601 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
NELFCD-201ENST00000460601 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
NELFCD-201ENST00000460601 A0A087WZ39 114 aa11.31□□□□□ -0.6
NELFCD-201ENST00000460601 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
NELFCD-201ENST00000460601 FOXI1Q12951 378 aa11.31□□□□□ -0.6
NELFCD-201ENST00000460601 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
NELFCD-201ENST00000460601 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
NELFCD-201ENST00000460601 Q9HAA7 133 aa11.31□□□□□ -0.6
NELFCD-201ENST00000460601 SPCS1Q9Y6A9 102 aa11.31□□□□□ -0.6
NELFCD-201ENST00000460601 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
NELFCD-201ENST00000460601 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
NELFCD-201ENST00000460601 MUC7Q8TAX7 377 aa11.3□□□□□ -0.6
NELFCD-201ENST00000460601 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
NELFCD-201ENST00000460601 FABP2P12104 132 aa11.3□□□□□ -0.6
NELFCD-201ENST00000460601 KRTAP1-5Q9BYS1 174 aa11.3□□□□□ -0.6
NELFCD-201ENST00000460601 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
NELFCD-201ENST00000460601 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
NELFCD-201ENST00000460601 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
NELFCD-201ENST00000460601 MIAQ16674 131 aa11.28□□□□□ -0.6
NELFCD-201ENST00000460601 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
NELFCD-201ENST00000460601 SMIM13P0DJ93 91 aa11.27□□□□□ -0.6
NELFCD-201ENST00000460601 COX7A2LO14548 114 aa11.27□□□□□ -0.61
NELFCD-201ENST00000460601 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
NELFCD-201ENST00000460601 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
NELFCD-201ENST00000460601 SCGB1D4Q6XE38 83 aa11.26□□□□□ -0.61
NELFCD-201ENST00000460601 DNAH10Q8IVF4 4471 aa11.26□□□□□ -0.61
NELFCD-201ENST00000460601 IGKV2D-24A0A075B6R9 120 aa11.26□□□□□ -0.61
NELFCD-201ENST00000460601 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms