RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 IGLC3P0DOY3 106 aa8.24□□□□□ -1.09
HDAC4-206ENST00000460235 KRTDAPP60985 99 aa8.24□□□□□ -1.09
HDAC4-206ENST00000460235 LINC00469Q8N7U9 141 aa8.24□□□□□ -1.09
HDAC4-206ENST00000460235 HIST1H2BLQ99880 126 aa8.24□□□□□ -1.09
HDAC4-206ENST00000460235 DPM2O94777 84 aa8.23□□□□□ -1.09
HDAC4-206ENST00000460235 CHAC1Q9BUX1 264 aa8.23□□□□□ -1.09
HDAC4-206ENST00000460235 A0A087WZ39 114 aa8.22□□□□□ -1.09
HDAC4-206ENST00000460235 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
HDAC4-206ENST00000460235 A0A0J9YXV3 536 aa8.22□□□□□ -1.09
HDAC4-206ENST00000460235 F8WDY8 70 aa8.22□□□□□ -1.09
HDAC4-206ENST00000460235 HERVK_113P61574 105 aa8.22□□□□□ -1.09
HDAC4-206ENST00000460235 FOXI1Q12951 378 aa8.22□□□□□ -1.09
HDAC4-206ENST00000460235 ZNF561-AS1K7EIQ3 104 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 C3orf79P0CE67 100 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 ODF1Q14990 250 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
HDAC4-206ENST00000460235 OR10D4PQ8NGN7 298 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 MRPL35Q9NZE8 188 aaKnown RBP8.21□□□□□ -1.1
HDAC4-206ENST00000460235 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.1
HDAC4-206ENST00000460235 IGLV5-45A0A087WSX0 123 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 IGKCP01834 107 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 PRSS2P07478 247 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 LINC01545Q5VT33 79 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 C5orf38Q86SI9 138 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
HDAC4-206ENST00000460235 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.19□□□□□ -1.1
HDAC4-206ENST00000460235 USP17L23D6RBM5 183 aa8.19□□□□□ -1.1
HDAC4-206ENST00000460235 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
HDAC4-206ENST00000460235 CDKN2A-AS1Q9UH64 79 aa8.19□□□□□ -1.1
HDAC4-206ENST00000460235 IGLV4-69A0A075B6H9 119 aa8.18□□□□□ -1.1
HDAC4-206ENST00000460235 IGHV3-64A0A075B6Q5 118 aa8.18□□□□□ -1.1
HDAC4-206ENST00000460235 A0A087WTM6 91 aa8.18□□□□□ -1.1
HDAC4-206ENST00000460235 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
HDAC4-206ENST00000460235 COX6A2Q02221 97 aa8.18□□□□□ -1.1
HDAC4-206ENST00000460235 NTN5Q8WTR8 489 aaPredicted RBP8.18□□□□□ -1.1
HDAC4-206ENST00000460235 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 HSBP1L1C9JCN9 74 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 RTL8CO15255 209 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 CXCL5P42830 114 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 C6orf226Q5I0X4 101 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 ORAOV1Q8WV07 137 aa8.17□□□□□ -1.1
HDAC4-206ENST00000460235 GVQW2A0A096LPI5 108 aaPredicted RBP8.16□□□□□ -1.1
HDAC4-206ENST00000460235 SCGB1D1O95968 90 aa8.16□□□□□ -1.1
HDAC4-206ENST00000460235 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
HDAC4-206ENST00000460235 CKS1BP61024 79 aa8.16□□□□□ -1.1
HDAC4-206ENST00000460235 C2orf48Q96LS8 159 aa8.16□□□□□ -1.1
HDAC4-206ENST00000460235 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
HDAC4-206ENST00000460235 PLECQ15149 4684 aaKnown RBP8.15□□□□□ -1.1
HDAC4-206ENST00000460235 LRCOL1A6NCL2 159 aa8.15□□□□□ -1.1
HDAC4-206ENST00000460235 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
HDAC4-206ENST00000460235 CDPF1Q6NVV7 123 aa8.15□□□□□ -1.1
HDAC4-206ENST00000460235 Q8IZM0 81 aa8.15□□□□□ -1.1
HDAC4-206ENST00000460235 Q8N814 137 aa8.15□□□□□ -1.1
HDAC4-206ENST00000460235 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
HDAC4-206ENST00000460235 TNP2Q05952 138 aa8.14□□□□□ -1.11
HDAC4-206ENST00000460235 MAPKAPK5-AS1Q8N8E1 139 aa8.14□□□□□ -1.11
HDAC4-206ENST00000460235 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
HDAC4-206ENST00000460235 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 LECT2O14960 151 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 NDUFA1O15239 70 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 PMCHL2Q9BQD1 86 aa8.13□□□□□ -1.11
HDAC4-206ENST00000460235 LINC00587B1AMM8 73 aa8.12□□□□□ -1.11
HDAC4-206ENST00000460235 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
HDAC4-206ENST00000460235 VPS13DQ5THJ4 4388 aa8.12□□□□□ -1.11
HDAC4-206ENST00000460235 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
HDAC4-206ENST00000460235 LEPROTO15243 131 aa8.11□□□□□ -1.11
HDAC4-206ENST00000460235 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
HDAC4-206ENST00000460235 NMUP48645 174 aa8.11□□□□□ -1.11
HDAC4-206ENST00000460235 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
HDAC4-206ENST00000460235 HIGD2BQ4VC39 106 aa8.11□□□□□ -1.11
HDAC4-206ENST00000460235 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
HDAC4-206ENST00000460235 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
HDAC4-206ENST00000460235 HERV-K104P63124 156 aa8.1□□□□□ -1.11
HDAC4-206ENST00000460235 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
HDAC4-206ENST00000460235 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
HDAC4-206ENST00000460235 CARD19Q96LW7 228 aa8.1□□□□□ -1.11
HDAC4-206ENST00000460235 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
HDAC4-206ENST00000460235 E9PLD3 99 aa8.09□□□□□ -1.11
HDAC4-206ENST00000460235 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.08□□□□□ -1.12
HDAC4-206ENST00000460235 DNAH1Q9P2D7 4330 aa8.07□□□□□ -1.12
HDAC4-206ENST00000460235 J3QQQ9 107 aa8.07□□□□□ -1.12
HDAC4-206ENST00000460235 GCSHP23434 173 aa8.07□□□□□ -1.12
HDAC4-206ENST00000460235 WFDC2Q14508 124 aa8.07□□□□□ -1.12
HDAC4-206ENST00000460235 KIAA0087Q14695 138 aa8.07□□□□□ -1.12
HDAC4-206ENST00000460235 S100A12P80511 92 aa8.06□□□□□ -1.12
HDAC4-206ENST00000460235 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
HDAC4-206ENST00000460235 COX17Q14061 63 aa8.06□□□□□ -1.12
HDAC4-206ENST00000460235 STPG4Q8N801 248 aa8.06□□□□□ -1.12
HDAC4-206ENST00000460235 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
HDAC4-206ENST00000460235 LINC00474Q9P2X8 69 aa8.06□□□□□ -1.12
HDAC4-206ENST00000460235 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms