RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 XAGE1AQ9HD64 81 aa10.7□□□□□ -0.7
PTPRU-205ENST00000460170 C6orf99Q4VX62 202 aa10.7□□□□□ -0.7
PTPRU-205ENST00000460170 CHCHD7Q9BUK0 85 aa10.69□□□□□ -0.7
PTPRU-205ENST00000460170 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
PTPRU-205ENST00000460170 PKD1L2Q7Z442 2459 aa10.69□□□□□ -0.7
PTPRU-205ENST00000460170 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
PTPRU-205ENST00000460170 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
PTPRU-205ENST00000460170 C1orf158Q8N1D5 194 aa10.68□□□□□ -0.7
PTPRU-205ENST00000460170 FAM110AQ9BQ89 295 aa10.68□□□□□ -0.7
PTPRU-205ENST00000460170 NDUFA7O95182 113 aa10.67□□□□□ -0.7
PTPRU-205ENST00000460170 SDIM1Q6ZPB5 146 aa10.67□□□□□ -0.7
PTPRU-205ENST00000460170 AMELXQ99217 191 aa10.67□□□□□ -0.7
PTPRU-205ENST00000460170 MTORP42345 2549 aa10.66□□□□□ -0.7
PTPRU-205ENST00000460170 SMIM1B2RUZ4 78 aa10.66□□□□□ -0.7
PTPRU-205ENST00000460170 IGLV1-51P01701 117 aa10.66□□□□□ -0.7
PTPRU-205ENST00000460170 UBE2AP49459 152 aa10.66□□□□□ -0.7
PTPRU-205ENST00000460170 LELP1Q5T871 98 aa10.66□□□□□ -0.7
PTPRU-205ENST00000460170 ZNF462Q96JM2 2506 aa10.66□□□□□ -0.7
PTPRU-205ENST00000460170 SMIM11BQ8TCY0 68 aa10.65□□□□□ -0.7
PTPRU-205ENST00000460170 TRAV23DV6A0A075B6W5 121 aa10.65□□□□□ -0.7
PTPRU-205ENST00000460170 SVIPQ8NHG7 77 aa10.65□□□□□ -0.7
PTPRU-205ENST00000460170 KIF25-AS1Q9Y6Z4 181 aa10.65□□□□□ -0.7
PTPRU-205ENST00000460170 UPK3BQ9BT76 320 aa10.65□□□□□ -0.71
PTPRU-205ENST00000460170 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
PTPRU-205ENST00000460170 LINC00526Q96FQ7 95 aa10.64□□□□□ -0.71
PTPRU-205ENST00000460170 XGP55808 180 aa10.64□□□□□ -0.71
PTPRU-205ENST00000460170 POLQO75417 2590 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 LINC00694P0DN24 101 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 Q8IZM0 81 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 WFDC9Q8NEX5 89 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 SYCNQ0VAF6 134 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 SHISA2Q6UWI4 295 aa10.63□□□□□ -0.71
PTPRU-205ENST00000460170 ATP5EP2Q5VTU8 51 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 NDUFS5O43920 106 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 NDUFB1O75438 58 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
PTPRU-205ENST00000460170 UQCRQO14949 82 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 COX6A2Q02221 97 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
PTPRU-205ENST00000460170 Q6ZSN1 163 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
PTPRU-205ENST00000460170 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
PTPRU-205ENST00000460170 PCSK5Q92824 1860 aa10.61□□□□□ -0.71
PTPRU-205ENST00000460170 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
PTPRU-205ENST00000460170 BPY2O14599 106 aa10.61□□□□□ -0.71
PTPRU-205ENST00000460170 ADAMTSL4-AS1Q5T5F5 129 aa10.61□□□□□ -0.71
PTPRU-205ENST00000460170 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
PTPRU-205ENST00000460170 DOPEY1Q5JWR5 2465 aa10.61□□□□□ -0.71
PTPRU-205ENST00000460170 MP68P56378 58 aa10.6□□□□□ -0.71
PTPRU-205ENST00000460170 COX17Q14061 63 aa10.6□□□□□ -0.71
PTPRU-205ENST00000460170 IMUPQ9GZP8 106 aa10.6□□□□□ -0.71
PTPRU-205ENST00000460170 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
PTPRU-205ENST00000460170 Q6ZQY7 126 aa10.59□□□□□ -0.71
PTPRU-205ENST00000460170 HIGD2AQ9BW72 106 aa10.59□□□□□ -0.71
PTPRU-205ENST00000460170 A0A087WZ39 114 aa10.59□□□□□ -0.71
PTPRU-205ENST00000460170 SMR3AQ99954 134 aa10.59□□□□□ -0.71
PTPRU-205ENST00000460170 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
PTPRU-205ENST00000460170 PLA2G2AP14555 144 aa10.58□□□□□ -0.72
PTPRU-205ENST00000460170 ENHOQ6UWT2 76 aa10.58□□□□□ -0.72
PTPRU-205ENST00000460170 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
PTPRU-205ENST00000460170 FHL2Q14192 279 aa10.58□□□□□ -0.72
PTPRU-205ENST00000460170 LINC00315P59091 139 aa10.57□□□□□ -0.72
PTPRU-205ENST00000460170 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
PTPRU-205ENST00000460170 MUC7Q8TAX7 377 aa10.57□□□□□ -0.72
PTPRU-205ENST00000460170 C16orf95Q9H693 158 aa10.57□□□□□ -0.72
PTPRU-205ENST00000460170 IGHV4-30-4P0DP06 118 aa10.56□□□□□ -0.72
PTPRU-205ENST00000460170 C20orf197Q8N268 126 aa10.56□□□□□ -0.72
PTPRU-205ENST00000460170 A0A0U1RQV1 116 aa10.56□□□□□ -0.72
PTPRU-205ENST00000460170 AGRNO00468 2067 aa10.56□□□□□ -0.72
PTPRU-205ENST00000460170 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
PTPRU-205ENST00000460170 CYSRT1A8MQ03 144 aa10.55□□□□□ -0.72
PTPRU-205ENST00000460170 M0R378 163 aa10.55□□□□□ -0.72
PTPRU-205ENST00000460170 PTPRBP23467 1997 aa10.55□□□□□ -0.72
PTPRU-205ENST00000460170 C3orf22Q8N5N4 141 aa10.55□□□□□ -0.72
PTPRU-205ENST00000460170 RPL28P46779 137 aaKnown RBP10.54□□□□□ -0.72
PTPRU-205ENST00000460170 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
PTPRU-205ENST00000460170 FAM240AA0A1B0GVK7 77 aa10.54□□□□□ -0.72
PTPRU-205ENST00000460170 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
PTPRU-205ENST00000460170 CCKP06307 115 aa10.53□□□□□ -0.72
PTPRU-205ENST00000460170 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
PTPRU-205ENST00000460170 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
PTPRU-205ENST00000460170 FAM19A5Q7Z5A7 132 aaPredicted RBP10.53□□□□□ -0.72
PTPRU-205ENST00000460170 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
PTPRU-205ENST00000460170 FAM19A1Q7Z5A9 133 aa10.52□□□□□ -0.72
PTPRU-205ENST00000460170 IGKV2-28A0A075B6P5 120 aa10.52□□□□□ -0.73
PTPRU-205ENST00000460170 IGKV2D-28P01615 120 aa10.52□□□□□ -0.73
PTPRU-205ENST00000460170 MPLKIPQ8TAP9 179 aa10.52□□□□□ -0.73
PTPRU-205ENST00000460170 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
PTPRU-205ENST00000460170 Q8N2B8 174 aa10.51□□□□□ -0.73
PTPRU-205ENST00000460170 ZNF73O43830 326 aaPredicted RBP10.51□□□□□ -0.73
PTPRU-205ENST00000460170 C5orf42Q9H799 3197 aa10.51□□□□□ -0.73
PTPRU-205ENST00000460170 ANKRD17O75179 2603 aaKnown RBP10.51□□□□□ -0.73
PTPRU-205ENST00000460170 USP17L23D6RBM5 183 aa10.5□□□□□ -0.73
PTPRU-205ENST00000460170 MRPL55Q7Z7F7 128 aaKnown RBP10.5□□□□□ -0.73
PTPRU-205ENST00000460170 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
PTPRU-205ENST00000460170 HTTP42858 3142 aa10.5□□□□□ -0.73
PTPRU-205ENST00000460170 ACANP16112 2415 aa10.5□□□□□ -0.73
PTPRU-205ENST00000460170 C9orf116Q5BN46 136 aaPredicted RBP10.49□□□□□ -0.73
PTPRU-205ENST00000460170 Q6Q795 121 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms