RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 NBDYA0A0U1RRE5 68 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 LOC285095A0A1B0GVY8 99 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 SFTA3P0C7M3 94 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 COX7B2Q8TF08 81 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 WFDC10AQ9H1F0 79 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 SIP14410 1827 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 ITSN1Q15811 1721 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 C3P01024 1663 aa1.9□□□□□ -2.1
CCDC50-203ENST00000460064 MYOM1P52179 1685 aa1.9□□□□□ -2.1
CCDC50-203ENST00000460064 KIAA0100Q14667 2235 aaKnown RBP1.9□□□□□ -2.1
CCDC50-203ENST00000460064 UNC13CQ8NB66 2214 aa1.9□□□□□ -2.1
CCDC50-203ENST00000460064 MRC1P22897 1456 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 CEP350Q5VT06 3117 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 BTAF1O14981 1849 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 A0A087WXM4 84 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 SAA2P0DJI9 122 aaPredicted RBP1.9□□□□□ -2.11
CCDC50-203ENST00000460064 SPINT3P49223 89 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 Q86TA4 180 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 ASXL1Q8IXJ9 1541 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 KIF1AQ12756 1690 aa1.9□□□□□ -2.11
CCDC50-203ENST00000460064 CEP170BQ9Y4F5 1589 aaPredicted RBP1.89□□□□□ -2.11
CCDC50-203ENST00000460064 MED12Q93074 2177 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 RALGAPBQ86X10 1494 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 RGPD1P0DJD0 1748 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 RTTNQ86VV8 2226 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 A0A087WTM6 91 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 A0A1B0GWA3 101 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 CEBPZOSA8MTT3 80 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 ARMS2P0C7Q2 107 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 IL9P15248 144 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 CCL18P55774 89 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 PLGLAQ15195 96 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 KRTAP21-3Q3LHN1 58 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 PRR15LQ9BU68 103 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 KLK9Q9UKQ9 250 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 ZMYM4Q5VZL5 1548 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 DLEC1Q9Y238 1755 aa1.89□□□□□ -2.11
CCDC50-203ENST00000460064 AFDNP55196 1824 aaKnown RBP1.89□□□□□ -2.11
CCDC50-203ENST00000460064 C1orf167Q5SNV9 1468 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 LRRC37A3O60309 1634 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 ARFGEF3Q5TH69 2177 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 AGLP35573 1532 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 FXYD1O00168 92 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 COX8AP10176 69 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 RPL37AP61513 92 aaKnown RBP1.88□□□□□ -2.11
CCDC50-203ENST00000460064 Q6JHZ5 121 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 C6orf201Q7Z4U5 140 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 PPP1R1CQ8WVI7 109 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 HILPDAQ9Y5L2 63 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 LAMA4Q16363 1823 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 ARFGEF1Q9Y6D6 1849 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 RICTORQ6R327 1708 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 PDCD11Q14690 1871 aaKnown RBP1.88□□□□□ -2.11
CCDC50-203ENST00000460064 PRXQ9BXM0 1461 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 ABCA9Q8IUA7 1624 aa1.88□□□□□ -2.11
CCDC50-203ENST00000460064 MUC6Q6W4X9 2439 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
CCDC50-203ENST00000460064 M0R3E3 92 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 LEPROTL1O95214 131 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
CCDC50-203ENST00000460064 GCHFRP30047 84 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 FXYD3Q14802 87 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 Q6ZSA8 131 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 C5orf56Q8N8D9 126 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 FDCSPQ8NFU4 85 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 AMELXQ99217 191 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 UBE2D4Q9Y2X8 147 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 LINC01558Q9Y6Z2 57 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 SPTBP11277 2137 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 PCDH15Q96QU1 1955 aa1.87□□□□□ -2.11
CCDC50-203ENST00000460064 SCN7AQ01118 1682 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 BRWD1Q9NSI6 2320 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 BAZ2BQ9UIF8 2168 aaKnown RBP1.86□□□□□ -2.11
CCDC50-203ENST00000460064 F8VRH5 84 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 M0R135 149 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 INE1O15225 51 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 DNAL4O96015 105 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 C3orf79P0CE67 100 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 FXYD4P59646 89 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 FAM74A4Q5TZK3 123 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 TMEM14CQ9P0S9 112 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 R4GMQ9 66 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 SHPRHQ149N8 1683 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 RREB1Q92766 1687 aa1.86□□□□□ -2.11
CCDC50-203ENST00000460064 TIAM1Q13009 1591 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 TRIOBPQ9H2D6 2365 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 MAP2P11137 1827 aaKnown RBP1.85□□□□□ -2.11
CCDC50-203ENST00000460064 D6R8Y8 96 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 LINC00322Q6ZN03 302 aaPredicted RBP1.85□□□□□ -2.11
CCDC50-203ENST00000460064 MUSTN1Q8IVN3 82 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 LINC00208Q96KT6 92 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 WFDC6Q9BQY6 131 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 V9GYV3 84 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 ABCA4P78363 2273 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 PI4KAP42356 2102 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 POLR1AO95602 1720 aaPredicted RBP1.85□□□□□ -2.11
CCDC50-203ENST00000460064 PLXNC1O60486 1568 aa1.85□□□□□ -2.11
CCDC50-203ENST00000460064 DEPDC5O75140 1603 aa1.84□□□□□ -2.11
CCDC50-203ENST00000460064 CD163L1Q9NR16 1453 aa1.84□□□□□ -2.11
CCDC50-203ENST00000460064 A0A087WVE0 104 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms