RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PMVKQ15126 192 aa10.35□□□□□ -0.75
SDF4-204ENST00000459994 C2orf88Q9BSF0 95 aa10.35□□□□□ -0.75
SDF4-204ENST00000459994 LINC00959A0A1B0GUT2 108 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 IFITM10A6NMD0 228 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 PRSS1P07477 247 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 XGP55808 180 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
SDF4-204ENST00000459994 TRAV12-1A0A0B4J245 112 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 SS18Q15532 418 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 ZC2HC1BQ5TFG8 222 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 RMI2Q96E14 147 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 Q9HAA7 133 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
SDF4-204ENST00000459994 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
SDF4-204ENST00000459994 UBE2D1P51668 147 aa10.32□□□□□ -0.76
SDF4-204ENST00000459994 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
SDF4-204ENST00000459994 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
SDF4-204ENST00000459994 EREGO14944 169 aa10.31□□□□□ -0.76
SDF4-204ENST00000459994 HAMPP81172 84 aa10.31□□□□□ -0.76
SDF4-204ENST00000459994 COX11Q9Y6N1 276 aa10.31□□□□□ -0.76
SDF4-204ENST00000459994 FAT1Q14517 4588 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 SEC11AP67812 179 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 WFDC2Q14508 124 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 CHCHD10Q8WYQ3 142 aaPredicted RBP10.3□□□□□ -0.76
SDF4-204ENST00000459994 C1orf43Q9BWL3 253 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 DNAH8Q96JB1 4490 aa10.3□□□□□ -0.76
SDF4-204ENST00000459994 IGKV2D-24A0A075B6R9 120 aa10.29□□□□□ -0.76
SDF4-204ENST00000459994 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
SDF4-204ENST00000459994 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
SDF4-204ENST00000459994 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
SDF4-204ENST00000459994 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
SDF4-204ENST00000459994 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
SDF4-204ENST00000459994 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
SDF4-204ENST00000459994 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
SDF4-204ENST00000459994 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
SDF4-204ENST00000459994 CHTOPQ9Y3Y2 248 aaKnown RBP10.28□□□□□ -0.76
SDF4-204ENST00000459994 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
SDF4-204ENST00000459994 PSCAO43653 123 aa10.27□□□□□ -0.77
SDF4-204ENST00000459994 IGLC3P0DOY3 106 aa10.27□□□□□ -0.77
SDF4-204ENST00000459994 XCL1P47992 114 aa10.27□□□□□ -0.77
SDF4-204ENST00000459994 ODF1Q14990 250 aa10.27□□□□□ -0.77
SDF4-204ENST00000459994 VPS13BQ7Z7G8 4022 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 IGLV4-69A0A075B6H9 119 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 GAGE12HA6NDE8 117 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 F8VRH5 84 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 KRTDAPP60985 99 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 HERVK_113P63121 156 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 FOXI1Q12951 378 aa10.26□□□□□ -0.77
SDF4-204ENST00000459994 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
SDF4-204ENST00000459994 H0Y8G0 127 aa10.25□□□□□ -0.77
SDF4-204ENST00000459994 GCSHP23434 173 aa10.25□□□□□ -0.77
SDF4-204ENST00000459994 COX6A2Q02221 97 aa10.25□□□□□ -0.77
SDF4-204ENST00000459994 Q8N814 137 aa10.25□□□□□ -0.77
SDF4-204ENST00000459994 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
SDF4-204ENST00000459994 MRPL35Q9NZE8 188 aaKnown RBP10.25□□□□□ -0.77
SDF4-204ENST00000459994 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
SDF4-204ENST00000459994 LECT2O14960 151 aa10.24□□□□□ -0.77
SDF4-204ENST00000459994 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
SDF4-204ENST00000459994 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
SDF4-204ENST00000459994 IGLV5-52A0A0A0MRZ9 124 aa10.23□□□□□ -0.77
SDF4-204ENST00000459994 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
SDF4-204ENST00000459994 OR10D4PQ8NGN7 298 aa10.23□□□□□ -0.77
SDF4-204ENST00000459994 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
SDF4-204ENST00000459994 FAM30AQ9NZY2 134 aa10.23□□□□□ -0.77
SDF4-204ENST00000459994 A0A087WZ39 114 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 C20orf202A1L168 122 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 EPM2AB3EWF7 344 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 COX7A2LO14548 114 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 DPM2O94777 84 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 PLNP26678 52 aa10.22□□□□□ -0.77
SDF4-204ENST00000459994 AKR1D1P51857 326 aa10.21□□□□□ -0.77
SDF4-204ENST00000459994 Q5VSD8 79 aa10.21□□□□□ -0.77
SDF4-204ENST00000459994 LINC00469Q8N7U9 141 aa10.21□□□□□ -0.77
SDF4-204ENST00000459994 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.77
SDF4-204ENST00000459994 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
SDF4-204ENST00000459994 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
SDF4-204ENST00000459994 PMCHL2Q9BQD1 86 aa10.2□□□□□ -0.78
SDF4-204ENST00000459994 H3BRM9 83 aa10.19□□□□□ -0.78
SDF4-204ENST00000459994 IGKCP01834 107 aa10.19□□□□□ -0.78
SDF4-204ENST00000459994 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
SDF4-204ENST00000459994 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
SDF4-204ENST00000459994 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
SDF4-204ENST00000459994 MALP21145 153 aa10.18□□□□□ -0.78
SDF4-204ENST00000459994 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
SDF4-204ENST00000459994 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
SDF4-204ENST00000459994 APOMO95445 188 aa10.17□□□□□ -0.78
SDF4-204ENST00000459994 TMEM170BQ5T4T1 132 aa10.17□□□□□ -0.78
SDF4-204ENST00000459994 IGHV3-64A0A075B6Q5 118 aa10.16□□□□□ -0.78
SDF4-204ENST00000459994 USP17L23D6RBM5 183 aa10.16□□□□□ -0.78
SDF4-204ENST00000459994 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
SDF4-204ENST00000459994 SMIM1B2RUZ4 78 aa10.15□□□□□ -0.78
SDF4-204ENST00000459994 INAFM2P0DMQ5 153 aa10.15□□□□□ -0.78
SDF4-204ENST00000459994 C15orf56Q8N910 161 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms